RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CCDC25Q86WR0 208 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 GRAMD2AQ8IUY3 354 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 OR2L13Q8N349 312 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 ADCY4Q8NFM4 1077 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 OR2M3Q8NG83 312 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 SFXN2Q96NB2 322 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 SDHAF3Q9NRP4 125 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 PAQR5Q9NXK6 330 aaPredicted RBP10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 NTMQ9P121 344 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 AP4B1Q9Y6B7 739 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 CADP27708 2225 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 PCNX3Q9H6A9 2034 aa10.11□□□□□ -0.79
CLSTN3-206ENST00000535668 ADAMDEC1O15204 470 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 SMPD2O60906 423 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 ULK1O75385 1050 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 SOX30O94993 753 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 LY6G6DO95868 133 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 ENO1P06733 434 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 FCGR2AP12318 317 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 DDCP20711 480 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 IMPDH1P20839 514 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 ADSLP30566 484 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 LCN1P31025 176 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 EVI2BP34910 448 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 CPA2P48052 419 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 PKNOX1P55347 436 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 CORO7P57737 925 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 PRR5P85299 388 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 TOMM20Q15388 145 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 LTB4RQ15722 352 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 ERCC6LQ2NKX8 1250 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 Q5PR19 223 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF678Q5SXM1 525 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 FBXW10Q5XX13 1052 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 FAM214BQ7L5A3 538 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 TAOK1Q7L7X3 1001 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 CCDC116Q8IYX3 515 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 GCNT2Q8N0V5 402 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 MEIOBQ8N635 442 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 OR7G2Q8NG99 324 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 SPATA3Q8NHX4 192 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 DCAKDQ8WVC6 231 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 L3HYPDHQ96EM0 354 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 PGM2Q96G03 612 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 SMR3AQ99954 134 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 LMF2Q9BU23 707 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 ACPTQ9BZG2 426 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 VPS11Q9H270 941 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 FOLH1BQ9HBA9 442 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 GLRX2Q9NS18 164 aa10.1□□□□□ -0.79
CLSTN3-206ENST00000535668 C2orf72A6NCS6 295 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 KLF4O43474 513 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 COQ9O75208 318 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 ESRRBO95718 433 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 IL33O95760 270 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 INHBAP08476 426 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 IL3P08700 152 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF17P17021 662 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 PRPH2P23942 346 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 PSMA4P25789 261 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 TIA1P31483 386 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 PRKAA2P54646 552 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 CDH13P55290 713 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 C2orf54Q08AI8 447 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 NNATQ16517 81 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 UNC50Q53HI1 259 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 EXOSC6Q5RKV6 272 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 VWA1Q6PCB0 445 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 RNF165Q6ZSG1 346 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 IKBIPQ70UQ0 350 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 TRIM46Q7Z4K8 759 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 HOMEZQ8IX15 550 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 OR9A2Q8NGT5 310 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 ACTRT2Q8TDY3 377 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 MTBPQ96DY7 904 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 C1GALT1C1Q96EU7 318 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 ADGRG7Q96K78 797 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 PAFAH2Q99487 392 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 PIGQQ9BRB3 760 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 PTGES2Q9H7Z7 377 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 GP6Q9HCN6 339 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 PYCARDQ9ULZ3 195 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 ZNF337Q9Y3M9 751 aa10.09□□□□□ -0.79
CLSTN3-206ENST00000535668 NBEAL1Q6ZS30 2694 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 A0A087WZY1 265 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 OR2M5A3KFT3 312 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 CCDC151A5D8V7 595 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ALG1L2C9J202 215 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 UPK1AO00322 258 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 PCDH7O60245 1069 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 TBX19O60806 448 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 SS18L1O75177 396 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 OR4F21O95013 312 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ABHD2P08910 425 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 SNRPAP09012 282 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 PSMB1P20618 241 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 TBXA2RP21731 343 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 IL12BP29460 328 aa10.08□□□□□ -0.8
CLSTN3-206ENST00000535668 ECHS1P30084 290 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms