RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	PCK2	Q16822	640 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	LINC01620	Q4KN68	170 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	LYPLAL1	Q5VWZ2	237 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ZSCAN25	Q6NSZ9	544 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	TMEM64	Q6YI46	380 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	PIWIL4	Q7Z3Z4	852 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	GOLGA7	Q7Z5G4	137 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	VPS36	Q86VN1	386 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ECHDC2	Q86YB7	292 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	LRRC43	Q8N309	656 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	DEFB123	Q8N688	67 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CCDC197	Q8NCU1	140 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ADAD2	Q8NCV1	583 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	OR9K2	Q8NGE7	335 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	OR5D13	Q8NGL4	314 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	OR1J1	Q8NGS3	322 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	OLIG1	Q8TAK6	271 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	TMEM37	Q8WXS4	190 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	SLC25A36	Q96CQ1	311 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CDCA3	Q99618	268 aa	Predicted RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	RTP3	Q9BQQ7	232 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	RHOXF2	Q9BQY4	288 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	CCM2	Q9BSQ5	444 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	GSDMC	Q9BYG8	508 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	WWP1	Q9H0M0	922 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	STMN4	Q9H169	189 aa	Predicted RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	ELOVL3	Q9HB03	270 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	KCNK13	Q9HB14	408 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	FGF21	Q9NSA1	209 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	TECR	Q9NZ01	308 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	NOSIP	Q9Y314	301 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	MRPL11	Q9Y3B7	192 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	PHLPP2	Q6ZVD8	1323 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	EIF3A	Q14152	1382 aa	Known RBP	4.09	□□□□□ -1.75
ATM-223	ENST00000533979	KIAA0232	Q92628	1395 aa		4.09	□□□□□ -1.75
ATM-223	ENST00000533979	RGPD3	A6NKT7	1758 aa	Predicted RBP	4.09	□□□□□ -1.76
ATM-223	ENST00000533979	RGPD4	Q7Z3J3	1758 aa		4.09	□□□□□ -1.76
ATM-223	ENST00000533979	METTL21EP	A6NDL7	271 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PCP4L1	A6NKN8	68 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	MEI4	A8MW99	385 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PRKRA	O75569	313 aa	Known RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	STAMBP	O95630	424 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	MT-ND2	P03891	347 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	S100A9	P06702	114 aa	Known RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	DBT	P11182	482 aa	Known RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PAX1	P15863	534 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ITGA2	P17301	1181 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PCMT1	P22061	227 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	GPX3	P22352	226 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CA4	P22748	312 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	LHCGR	P22888	699 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	USP6	P35125	1406 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CYLC1	P35663	651 aa	Predicted RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	NAAA	Q02083	359 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	TRDN	Q13061	729 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	GAGE5	Q13069	117 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	GAGE6	Q13070	117 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	DOC2A	Q14183	400 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ITSN1	Q15811	1721 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ZSCAN26	Q16670	478 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CLPP	Q16740	277 aa	Predicted RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ACSF3	Q4G176	576 aa	Predicted RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PDSS1	Q5T2R2	415 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PRAMEF5	Q5TYX0	476 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PRAMEF6	Q5VXH4	476 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CARD17	Q5XLA6	110 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	OR4C11	Q6IEV9	310 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	WASH2P	Q6VEQ5	465 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	TRPM8	Q7Z2W7	1104 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	C16orf62	Q7Z3J2	963 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF554	Q86TJ5	538 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	VSTM4	Q8IW00	320 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CCDC65	Q8IXS2	484 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	EFCAB13	Q8IY85	973 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CCDC36	Q8IYA8	594 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	EID3	Q8N140	333 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ARFGAP2	Q8N6H7	521 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CNBD1	Q8NA66	436 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	MLKL	Q8NB16	471 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	OR5AU1	Q8NGC0	362 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	OR13C5	Q8NGS8	318 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	WDR36	Q8NI36	951 aa	Known RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	SLC22A8	Q8TCC7	542 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	CD99L2	Q8TCZ2	262 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	SLC35C1	Q96A29	364 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	C11orf24	Q96F05	449 aa	Predicted RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	KRT12	Q99456	494 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	OMD	Q99983	421 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	NLN	Q9BYT8	704 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	LAT2	Q9GZY6	243 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	KAT8	Q9H7Z6	458 aa	Known RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	VIPAS39	Q9H9C1	493 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PELI2	Q9HAT8	420 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	SGK2	Q9HBY8	427 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	TNRC6C	Q9HCJ0	1690 aa	Known RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ZFP14	Q9HCL3	533 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	RAB18	Q9NP72	206 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms