RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 A6NIZ1 184 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 GNAO1P09471 354 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 CSNK1EP49674 416 aaKnown RBP13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 RAP1BP61224 184 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 RAP1AP62834 184 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 CTBSQ01459 385 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 PPP1R3BQ86XI6 285 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 FAM46AQ96IP4 442 aaKnown RBP13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 ATG5Q9H1Y0 275 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 LRIT1Q9P2V4 623 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 RNF215Q9Y6U7 377 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 LRRTM2O43300 516 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 BNIP3Q12983 259 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 HNRNPA0Q13151 305 aaKnown RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 ATAD3CQ5T2N8 411 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 PARM1Q6UWI2 310 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 MCATQ8IVS2 390 aaKnown RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 BOLLQ8N9W6 283 aaKnown RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 WDR20Q8TBZ3 569 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 HAVCR2Q8TDQ0 301 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 SPTSSAQ969W0 71 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 METTL2AQ96IZ6 378 aaKnown RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 NELFAQ9H3P2 528 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 H7C417 338 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 FASLGP48023 281 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 GNMTQ14749 295 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 CNPY1Q3B7I2 92 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF517Q6ZMY9 492 aaPredicted RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 OR13C3Q8NGS6 347 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 CCNL2Q96S94 520 aaPredicted RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 PGAP2Q9UHJ9 254 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 EFCAB7A8K855 629 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 KIAA0355O15063 1070 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 CRABP1P29762 137 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 MC3RP41968 323 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 CTXN1P60606 82 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 NFATC4Q14934 902 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 GTDC1Q4AE62 458 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 PRAMEF8Q5VWM4 474 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 PRAMEF7Q5VXH5 474 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 VTCN1Q7Z7D3 282 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 PGBD5Q8N414 524 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 DTX3Q8N9I9 347 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 FAM46BQ96A09 425 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 NAALAD2Q9Y3Q0 740 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 ANTXRLA6NF34 631 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 NDUFB2O95178 105 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 EIF2S3P41091 472 aaKnown RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 YPEL5P62699 121 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 TMEM69Q5SWH9 247 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 TLDC1Q6P9B6 456 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 VASH1Q7L8A9 365 aaPredicted RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 PDSS2Q86YH6 399 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 OR4K5Q8NGD3 323 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 OR52E2Q8NGJ4 325 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 GATAD2BQ8WXI9 593 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 MMP27Q9H306 513 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 RABL2AQ9UBK7 228 aaPredicted RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 EXTL2Q9UBQ6 330 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 NENFQ9UMX5 172 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 RABL2BQ9UNT1 228 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 HIF3AQ9Y2N7 669 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 HEMK1Q9Y5R4 338 aaPredicted RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 BCAT2O15382 392 aaPredicted RBP13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 TSPAN9O75954 239 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 ACTL6BO94805 426 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 SNAP29O95721 258 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 NPRL3Q12980 569 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 TMEM201Q5SNT2 666 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 BCL2L15Q5TBC7 163 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 OR5D16Q8NGK9 328 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 PPP1R14BQ96C90 147 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 LRR1Q96L50 414 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 CWH43Q9H720 699 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 TAAR2Q9P1P5 351 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 CPNE7Q9UBL6 633 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 HSPE1-MOB4S4R3N1 261 aa13.97□□□□□ -0.17
PCDHA9-202ENST00000532602 URB1O60287 2271 aaKnown RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 BORCS7-ASMTA0A0B4J1R7 106 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 CENPBD1B2RD01 187 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 FOXE1O00358 373 aaPredicted RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 PRKYO43930 277 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 F11P03951 625 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 GCH1P30793 250 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 MAP2K4P45985 399 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 CSNK2A1P68400 391 aaPredicted RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 EEF1A2Q05639 463 aaKnown RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 PKDCCQ504Y2 493 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 MEX3DQ86XN8 651 aaKnown RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 TRIM43Q96BQ3 446 aaPredicted RBP13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 DMRT3Q9NQL9 472 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 RASAL1O95294 804 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 OPN1LWP04000 364 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 GTF2F2P13984 249 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 XCR1P46094 333 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 LEG1Q6P5S2 330 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 SLC37A3Q8NCC5 494 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 AGBL5Q8NDL9 886 aa13.96□□□□□ -0.17
PCDHA9-202ENST00000532602 SLC41A3Q96GZ6 507 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms