RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 IGF1P05019 195 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 STAG3L2P0CL84 134 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 PRKAR1AP10644 381 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ANXA3P12429 323 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 HLA-DOBP13765 273 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ZNF20P17024 532 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 SPAM1P38567 509 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ZFP36L2P47974 494 aaKnown RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 RAB11AP62491 216 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 RPS6P62753 249 aaKnown RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 LIPEQ05469 1076 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ENPEPQ07075 957 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 TRAF3Q13114 568 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 SF3B4Q15427 424 aaKnown RBP eCLIP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 RAB11BQ15907 218 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 EXT1Q16394 746 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 MICBQ29980 383 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ZNF260Q3ZCT1 412 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 GLYR1Q49A26 553 aaPredicted RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 GGTA1PQ4G0N0 100 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 SBK1Q52WX2 424 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 BEND6Q5SZJ8 279 aaPredicted RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 DCST2Q5T1A1 773 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 PDZK1Q5T2W1 519 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ATP1A1-AS1Q5TC04 95 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 LIPNQ5VXI9 398 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 PDPK2PQ6A1A2 396 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 STEAP1BQ6NZ63 245 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 KCNIP4Q6PIL6 250 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 TMEM220Q6QAJ8 160 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ATRAIDQ6UW56 229 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 Q6ZVQ6 151 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 CNGA4Q8IV77 575 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 GABRG1Q8N1C3 465 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 DHRSXQ8N5I4 330 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ALLCQ8N6M5 410 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 LNX1Q8TBB1 728 aaPredicted RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 FBXO25Q8TCJ0 367 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 SMG7Q92540 1137 aaKnown RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ANP32BQ92688 251 aaKnown RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 SLCO2A1Q92959 643 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 LHX4Q969G2 390 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 MRPL24Q96A35 216 aaKnown RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 TMIGD2Q96BF3 282 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 OMA1Q96E52 524 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 DUX5Q96PT3 197 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 TTYH2Q9BSA4 534 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 PAPOLGQ9BWT3 736 aaKnown RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 SLC25A51Q9H1U9 297 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 EBF3Q9H4W6 596 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 AZI2Q9H6S1 392 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ALG9Q9H6U8 611 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 PELI2Q9HAT8 420 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 PARVGQ9HBI0 331 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 NT5MQ9NPB1 228 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 PSMC3IPQ9P2W1 217 aaPredicted RBP3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ANAPC7Q9UJX3 599 aa3.8□□□□□ -1.8
AC055878.1-201ENST00000531858 ATP10AO60312 1499 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 INSRP06213 1382 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 IGLV5-45A0A087WSX0 123 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 A0A0A6YYD4 124 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 A0A1B0GVT2 93 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 HAS3O00219 553 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 MSH4O15457 936 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 PRKAB2O43741 272 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 CABYRO75952 493 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ANXA9O76027 345 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ANGPTL1O95841 491 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 IGLV2-14P01704 120 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 IGHG3P01860 377 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 HOXC6P09630 235 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 PRF1P14222 555 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 LIFP15018 202 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ETS2P15036 469 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 IMPDH1P20839 514 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 RPL13AP40429 203 aaKnown RBP3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 OR3A2P47893 321 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 BACE1P56817 501 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 SLC8A3P57103 927 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 PLP1P60201 277 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ABCE1P61221 599 aaKnown RBP3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 NTHL1P78549 312 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 BDH1Q02338 343 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 PAX5Q02548 391 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ITPK1Q13572 414 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 USF2Q15853 346 aaPredicted RBP3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 PRTGQ2VWP7 1150 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 SLC18B1Q6NT16 456 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ERICH5Q6P6B1 374 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 RHBDF2Q6PJF5 856 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 UNQ6126/PRO20091Q6UXV3 157 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 LEKR1Q6ZMV7 388 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ZNF788Q6ZQV5 615 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 KIAA1328Q86T90 577 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 FJX1Q86VR8 437 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 SFR1Q86XK3 245 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 SYCE1Q8N0S2 351 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 FAM58AQ8N1B3 248 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms