RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 KLRF1Q9NZS2 232 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 B4GALT7Q9UBV7 327 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 MRTO4Q9UKD2 239 aaKnown RBP11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 PCDHGB4Q9UN71 923 aa11.59□□□□□ -0.55
CCDC90B-216ENST00000529856 DNAJC13O75165 2243 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 C2orf72A6NCS6 295 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 SNPHO15079 494 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 UBDO15205 165 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 SUSD5O60279 629 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FADS1O60427 444 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 SLC22A3O75751 556 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 SOX30O94993 753 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 KCNH1O95259 989 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 LDLRP01130 860 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 IGKV1D-16P01601 117 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 ABOP16442 354 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 ELAVL4P26378 380 aaKnown RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 MASP1P48740 699 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 IDH3AP50213 366 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 DGKQP52824 942 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 GAS1P54826 345 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 CASP6P55212 293 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 LASP1Q14847 261 aaKnown RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FAM174BQ3ZCQ3 159 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 SPDYE7PQ495Y7 208 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 CDC73Q6P1J9 531 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 ANGPTL8Q6UXH0 198 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 ACAD11Q709F0 780 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FJX1Q86VR8 437 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 DOLPP1Q86YN1 238 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 GLB1L3Q8NCI6 653 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 OR4A15Q8NGL6 344 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 OR1J4Q8NGS1 313 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FAM57AQ8TBR7 257 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FAM110BQ8TC76 370 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 RMND5BQ96G75 393 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 STACQ99469 402 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 ZBTB18Q99592 522 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 CCDC28BQ9BUN5 200 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 ACTRT3Q9BYD9 372 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 PIGUQ9H490 435 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 SDR39U1Q9NRG7 319 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 DUSP22Q9NRW4 184 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FAM120CQ9NX05 1096 aaKnown RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 BTNL2Q9UIR0 455 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 TINAGQ9UJW2 476 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FAF1Q9UNN5 650 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 C15orf41Q9Y2V0 281 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 LIPGQ9Y5X9 500 aa11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 USP9XQ93008 2570 aaPredicted RBP11.58□□□□□ -0.56
CCDC90B-216ENST00000529856 FREM3P0C091 2139 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 MYO7BQ6PIF6 2116 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 TRGV5A0A0B4J1U4 118 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 OR14I1A6ND48 311 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 C9JVG2 144 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 CCL21O00585 134 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 AQP7O14520 342 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 PRRG2O14669 202 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 ADAM10O14672 748 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 GNB5O14775 395 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 ATP8B1O43520 1251 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 HCN1O60741 890 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 KCNK2O95069 426 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 CPSF4O95639 269 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 HPNP05981 417 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 PGRP06401 933 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 RNF224P0DH78 156 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 GDF1P27539 372 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 PTPN6P29350 595 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 EVI2BP34910 448 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 RFX3P48380 749 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 AQP5P55064 265 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 PER3P56645 1201 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 TP53BP2Q13625 1128 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 HSP90B2PQ58FF3 399 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 BHLHB9Q6PI77 547 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 C6orf120Q7Z4R8 191 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 ANKRD46Q86W74 232 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 ARFGAP2Q8N6H7 521 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 WDSUB1Q8N9V3 476 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 OR5AK3PQ8NH89 298 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 GOT1L1Q8NHS2 421 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 FBXO30Q8TB52 745 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 JADE3Q92613 823 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 OTUB1Q96FW1 271 aaPredicted RBP11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 MARK4Q96L34 752 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 CCDC115Q96NT0 180 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 EBF4Q9BQW3 602 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 BTBD2Q9BX70 525 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 LDAHQ9H6V9 325 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 TCF7L2Q9NQB0 619 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 FLRT3Q9NZU0 649 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 ZIM2Q9NZV7 527 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 SH3BGRL2Q9UJC5 107 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 ABCG2Q9UNQ0 655 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 HRH3Q9Y5N1 445 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 WIF1Q9Y5W5 379 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 COL12A1Q99715 3063 aa11.57□□□□□ -0.56
CCDC90B-216ENST00000529856 NPIPA2E9PIF3 369 aa11.56□□□□□ -0.56
CCDC90B-216ENST00000529856 NPIPA3F8WFD2 350 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms