RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FBXL2Q9UKC9 423 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 SLC6A5Q9Y345 797 aa16.3■□□□□ 0.2
CLK4-211ENST00000522556 KDM4EB2RXH2 506 aaPredicted RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 AQP7O14520 342 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 PRRG2O14669 202 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 KLF11O14901 512 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 SCN2BO60939 215 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 NKX2-2O95096 273 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 SNX4O95219 450 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 TCEA1P23193 301 aaKnown RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 RPL3P39023 403 aaKnown RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 MAN2A2P49641 1150 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 PNLIPRP2P54317 469 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 CASP6P55212 293 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 UFM1P61960 85 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 RPS26P62854 115 aaKnown RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 MRPS22P82650 360 aaKnown RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 LASP1Q14847 261 aaKnown RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 CYP27C1Q4G0S4 372 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 SPANXN4Q5MJ08 99 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 WIPI1Q5MNZ9 446 aaPredicted RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 DCST1Q5T197 706 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 CCNJQ5T5M9 372 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 SLC30A6Q6NXT4 461 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 YRDCQ86U90 279 aaKnown RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 TRIM42Q8IWZ5 723 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 PSMA8Q8TAA3 256 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 GPR151Q8TDV0 419 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 OR5P2Q8WZ92 322 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 DPY30Q9C005 99 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 BHLHE41Q9C0J9 482 aaPredicted RBP16.29■□□□□ 0.2
CLK4-211ENST00000522556 SERHL2Q9H4I8 314 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 EXO5Q9H790 373 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 Q9N2J8 555 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 WIF1Q9Y5W5 379 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 KCNE3Q9Y6H6 103 aa16.29■□□□□ 0.2
CLK4-211ENST00000522556 PHF3Q92576 2039 aaKnown RBP16.28■□□□□ 0.2
CLK4-211ENST00000522556 FADS1O60427 444 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 TRAPPC6AO75865 159 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 IL33O95760 270 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 HMGN2P05204 90 aaKnown RBP16.28■□□□□ 0.2
CLK4-211ENST00000522556 EVI2BP34910 448 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 SOAT1P35610 550 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 KRT20P35900 424 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 PER3P56645 1201 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 RPP38P78345 283 aaKnown RBP16.28■□□□□ 0.2
CLK4-211ENST00000522556 STX5Q13190 355 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 TP53BP2Q13625 1128 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 GRAMD1BQ3KR37 738 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 GXYLT1Q4G148 440 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 RTL6Q6ICC9 239 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 FIGNL1Q6PIW4 674 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 APOOLQ6UXV4 268 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 FAM83FQ8NEG4 500 aaPredicted RBP16.28■□□□□ 0.2
CLK4-211ENST00000522556 OR1J4Q8NGS1 313 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 NEIL3Q8TAT5 605 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 JADE3Q92613 823 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 CDS1Q92903 461 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 TMCO6Q96DC7 493 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 MAELQ96JY0 434 aaKnown RBP16.28■□□□□ 0.2
CLK4-211ENST00000522556 ATAD3AQ9NVI7 634 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 GPATCH2Q9NW75 528 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 B4GALT7Q9UBV7 327 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 FAM215AQ9Y5M1 114 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 GPR45Q9Y5Y3 372 aa16.28■□□□□ 0.2
CLK4-211ENST00000522556 HMGB1P1B2RPK0 211 aaPredicted RBP16.27■□□□□ 0.2
CLK4-211ENST00000522556 CFLARO15519 480 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 SUSD5O60279 629 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 ABCB7O75027 752 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 HPNP05981 417 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 ESRRAP11474 423 aaPredicted RBP16.27■□□□□ 0.2
CLK4-211ENST00000522556 GP1BBP13224 206 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 CCT3P49368 545 aaKnown RBP16.27■□□□□ 0.2
CLK4-211ENST00000522556 DGKQP52824 942 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 CASP9P55211 416 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 PPP2R2AP63151 447 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 EFR3AQ14156 821 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 TOMM20Q15388 145 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 ZNHIT3Q15649 155 aaPredicted RBP16.27■□□□□ 0.2
CLK4-211ENST00000522556 DECR1Q16698 335 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 FAM174BQ3ZCQ3 159 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 NXNQ6DKJ4 435 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 PAOXQ6QHF9 649 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 MAMDC2Q7Z304 686 aaPredicted RBP16.27■□□□□ 0.2
CLK4-211ENST00000522556 MRGPRGQ86SM5 289 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 KIRREL3Q8IZU9 778 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 CDRT4Q8N9R6 151 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 PIWIL2Q8TC59 973 aaKnown RBP16.27■□□□□ 0.2
CLK4-211ENST00000522556 C3orf14Q9HBI5 128 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 ACKR4Q9NPB9 350 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 QPCTLQ9NXS2 382 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 SUCOQ9UBS9 1254 aaKnown RBP16.27■□□□□ 0.2
CLK4-211ENST00000522556 USH1CQ9Y6N9 552 aa16.27■□□□□ 0.2
CLK4-211ENST00000522556 C15orf38-AP3S2A0A0A6YYH1 394 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 NPIPA5A0A0B4J1W7 369 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 TRPC5OSA6NMA1 111 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 NPIPA7E9PJI5 369 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 E9PLN8 166 aa16.26■□□□□ 0.19
CLK4-211ENST00000522556 HCN1O60741 890 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms