RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 MAP4K2Q12851 820 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 CUL3Q13618 768 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 EFR3AQ14156 821 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 GANABQ14697 944 aaKnown RBP9.35□□□□□ -0.91
CLDND1-231ENST00000515620 LTB4RQ15722 352 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLDND1-231ENST00000515620 TRMT12Q53H54 448 aaKnown RBP9.35□□□□□ -0.91
CLDND1-231ENST00000515620 AGAP6Q5VW22 663 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 STEAP4Q687X5 459 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 GGNQ86UU5 652 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-231ENST00000515620 RNF138Q8WVD3 245 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 EFHD2Q96C19 240 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-231ENST00000515620 LRRC1Q9BTT6 524 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 GRIP2Q9C0E4 1043 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 RHOJQ9H4E5 214 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 MED11Q9P086 117 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 XPR1Q9UBH6 696 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 PRODH2Q9UF12 536 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 ZNF639Q9UID6 485 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 GPR55Q9Y2T6 319 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-231ENST00000515620 PCDHGA11Q9Y5H2 935 aa9.35□□□□□ -0.91
CLDND1-231ENST00000515620 FREM1Q5H8C1 2179 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 DPRXA6NFQ7 191 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 SHISA9B4DS77 424 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 SUPT3HB4E1H0 165 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 SUPT3HO75486 399 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 GCM2O75603 506 aaPredicted RBP9.34□□□□□ -0.91
CLDND1-231ENST00000515620 ERAL1O75616 437 aaKnown RBP9.34□□□□□ -0.91
CLDND1-231ENST00000515620 EGR1P18146 543 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 GZMKP49863 264 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 ATP6V0D1P61421 351 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 LSM11P83369 360 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLDND1-231ENST00000515620 DUSP2Q05923 314 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 MGAT5Q09328 741 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 CPSF6Q16630 551 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLDND1-231ENST00000515620 LGSNQ5TDP6 509 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 FAM180BQ6P0A1 224 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 SEZ6L2Q6UXD5 910 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 TEX9Q8N6V9 391 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 OR52B6Q8NGF0 335 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 PIWIL2Q8TC59 973 aaKnown RBP9.34□□□□□ -0.91
CLDND1-231ENST00000515620 C10orf105Q8TEF2 133 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 UBTD2Q8WUN7 234 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 HSD17B8Q92506 261 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 KLHL29Q96CT2 875 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 BTBD9Q96Q07 612 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 HDHD5Q9BXW7 423 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 ALG9Q9H6U8 611 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 PTGES2Q9H7Z7 377 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 ANKRA2Q9H9E1 313 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 FBXO34Q9NWN3 711 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 NUDT4Q9NZJ9 180 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 ASIC3Q9UHC3 531 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 MCTS1Q9ULC4 181 aaKnown RBP9.34□□□□□ -0.91
CLDND1-231ENST00000515620 TSC22D4Q9Y3Q8 395 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 ANGPTL3Q9Y5C1 460 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 AP4B1Q9Y6B7 739 aa9.34□□□□□ -0.91
CLDND1-231ENST00000515620 MALRD1Q5VYJ5 2156 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 H0YIV9 168 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 UBXN8O00124 270 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 DNALI1O14645 258 aaPredicted RBP9.33□□□□□ -0.92
CLDND1-231ENST00000515620 CXCL13O43927 109 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 GMFGO60234 142 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 PIAS1O75925 651 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 SYNGR4O95473 234 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 NTN1O95631 604 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 KLK1P06870 262 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 TUBBP07437 444 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 CT45A8P0DMV1 189 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 CT45A9P0DMV2 189 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 CSNK2A2P19784 350 aaPredicted RBP9.33□□□□□ -0.92
CLDND1-231ENST00000515620 PIK3CGP48736 1102 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 POU4F1Q01851 419 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 GGTLC2Q14390 218 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 RAB35Q15286 201 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 PPP1R7Q15435 360 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 FAM174BQ3ZCQ3 159 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 CT45A2Q5DJT8 189 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 C11orf71Q6IPW1 123 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 MFSD12Q6NUT3 480 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 SLC48A1Q6P1K1 146 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 NPSR1Q6W5P4 371 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 CCDC25Q86WR0 208 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 PDIK1LQ8N165 341 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 GABRG1Q8N1C3 465 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 RFLNBQ8N5W9 214 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 CEP112Q8N8E3 955 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 BANPQ8N9N5 519 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 OR10D3Q8NH80 312 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 KISS1RQ969F8 398 aaPredicted RBP9.33□□□□□ -0.92
CLDND1-231ENST00000515620 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 MSI2Q96DH6 328 aaKnown RBP9.33□□□□□ -0.92
CLDND1-231ENST00000515620 C1GALT1C1Q96EU7 318 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 TSPAN17Q96FV3 270 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 MS4A14Q96JA4 679 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
CLDND1-231ENST00000515620 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms