RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 OR1A2Q9Y585 309 aa14.02□□□□□ -0.17
USP38-202ENST00000510377 WASH3PC4AMC7 463 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 L7N2F9 121 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 UBXN7O94888 489 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 H2AFB2P0C5Z0 115 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 GKN3PP0CG01 181 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 ACVR2AP27037 513 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 OMPP47874 163 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 FABP5Q01469 135 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 OR4C11Q6IEV9 310 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 CNKSR3Q6P9H4 555 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 SRFBP1Q8NEF9 429 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 OR9A2Q8NGT5 310 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 COQ8AQ8NI60 647 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 DHRS1Q96LJ7 313 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 BARHL1Q9BZE3 327 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 HCN3Q9P1Z3 774 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 NTNG1Q9Y2I2 539 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3DA0A087WVF3 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3IA0A087WXS9 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3EA0A087X179 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3KA0A087X1G2 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 ZC3H12DA2A288 527 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3FA6NER0 549 aaPredicted RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3LB9A6J9 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 PLPP1O14494 284 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 ASGR2P07307 311 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3HP0C7X1 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 KCNJ5P48544 419 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 CLDN2P57739 230 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 ASAH1Q13510 395 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 CCNJQ5T5M9 372 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3GQ6DHY5 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3CQ6IPX1 549 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 TBC1D3Q8IZP1 549 aaPredicted RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 NATD1Q8N6N6 113 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 OR14C36Q8NHC7 312 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 OTUB2Q96DC9 234 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 METTL2AQ96IZ6 378 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 NDUFB11Q9NX14 153 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 DNMT3BQ9UBC3 853 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 FAM25EA8MYX2 175 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 FLRT2O43155 660 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 RFPL3O75679 317 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 SRP9P49458 86 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 GPLD1P80108 840 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 C6orf132Q5T0Z8 1188 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 FIGNL1Q6PIW4 674 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 FAM220AQ7Z4H9 259 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 COMMD7Q86VX2 200 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 OOSP2Q86WS3 158 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 POLDIP3Q9BY77 421 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 CPEB1Q9BZB8 566 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 PFDN2Q9UHV9 154 aa14.01□□□□□ -0.17
USP38-202ENST00000510377 AK6Q9Y3D8 172 aaKnown RBP14.01□□□□□ -0.17
USP38-202ENST00000510377 LRRN3E7EW58 273 aa14□□□□□ -0.17
USP38-202ENST00000510377 PPM1DO15297 605 aa14□□□□□ -0.17
USP38-202ENST00000510377 HRO43593 1189 aa14□□□□□ -0.17
USP38-202ENST00000510377 FGF18O76093 207 aa14□□□□□ -0.17
USP38-202ENST00000510377 OR7A10O76100 309 aa14□□□□□ -0.17
USP38-202ENST00000510377 MT-ND4P03905 459 aa14□□□□□ -0.17
USP38-202ENST00000510377 CMPK1P30085 196 aa14□□□□□ -0.17
USP38-202ENST00000510377 EVI2BP34910 448 aa14□□□□□ -0.17
USP38-202ENST00000510377 GBX2P52951 348 aaPredicted RBP14□□□□□ -0.17
USP38-202ENST00000510377 SNRPGP62308 76 aaKnown RBP14□□□□□ -0.17
USP38-202ENST00000510377 SIM1P81133 766 aaPredicted RBP14□□□□□ -0.17
USP38-202ENST00000510377 RTL4Q6ZR62 310 aa14□□□□□ -0.17
USP38-202ENST00000510377 HTR3DQ70Z44 454 aa14□□□□□ -0.17
USP38-202ENST00000510377 SLITRK4Q8IW52 837 aa14□□□□□ -0.17
USP38-202ENST00000510377 KLHDC8AQ8IYD2 350 aa14□□□□□ -0.17
USP38-202ENST00000510377 PRRC1Q96M27 445 aa14□□□□□ -0.17
USP38-202ENST00000510377 PDCD10Q9BUL8 212 aa14□□□□□ -0.17
USP38-202ENST00000510377 LRRN3Q9H3W5 708 aa14□□□□□ -0.17
USP38-202ENST00000510377 NLGN3Q9NZ94 848 aa14□□□□□ -0.17
USP38-202ENST00000510377 SLC7A7Q9UM01 511 aa14□□□□□ -0.17
USP38-202ENST00000510377 HS3ST2Q9Y278 367 aa14□□□□□ -0.17
USP38-202ENST00000510377 C1orf226A1L170 272 aa14□□□□□ -0.17
USP38-202ENST00000510377 ADH5P11766 374 aa14□□□□□ -0.17
USP38-202ENST00000510377 CERS1P27544 350 aa14□□□□□ -0.17
USP38-202ENST00000510377 GABRA5P31644 462 aa14□□□□□ -0.17
USP38-202ENST00000510377 BMP8BP34820 402 aa14□□□□□ -0.17
USP38-202ENST00000510377 MLLT3P42568 568 aaPredicted RBP14□□□□□ -0.17
USP38-202ENST00000510377 PITPNBP48739 271 aa14□□□□□ -0.17
USP38-202ENST00000510377 LSM11P83369 360 aaKnown RBP eCLIP14□□□□□ -0.17
USP38-202ENST00000510377 AKIRIN2Q53H80 203 aa14□□□□□ -0.17
USP38-202ENST00000510377 ARMC6Q6NXE6 501 aa14□□□□□ -0.17
USP38-202ENST00000510377 BMP8AQ7Z5Y6 402 aa14□□□□□ -0.17
USP38-202ENST00000510377 SLC44A3Q8N4M1 653 aa14□□□□□ -0.17
USP38-202ENST00000510377 CEP76Q8TAP6 659 aa14□□□□□ -0.17
USP38-202ENST00000510377 NRTNQ99748 197 aa14□□□□□ -0.17
USP38-202ENST00000510377 OR51J1Q9H342 316 aa14□□□□□ -0.17
USP38-202ENST00000510377 CDCP1Q9H5V8 836 aa14□□□□□ -0.17
USP38-202ENST00000510377 WDR26Q9H7D7 661 aa14□□□□□ -0.17
USP38-202ENST00000510377 FTSJ1Q9UET6 329 aa14□□□□□ -0.17
USP38-202ENST00000510377 PCM1Q15154 2024 aa14□□□□□ -0.17
USP38-202ENST00000510377 OR52A4PA6NMU1 304 aa14□□□□□ -0.17
USP38-202ENST00000510377 CRYBB2P43320 205 aa14□□□□□ -0.17
USP38-202ENST00000510377 PITPNAQ00169 270 aa14□□□□□ -0.17
USP38-202ENST00000510377 PUM1Q14671 1186 aaKnown RBP eCLIP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms