RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-225	ENST00000508387	PKNOX2	Q96KN3	472 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	C3orf30	Q96M34	536 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	CCT7	Q99832	543 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	KLHDC3	Q9BQ90	382 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	IQCG	Q9H095	443 aa	Known RBP	11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	STMN4	Q9H169	189 aa	Predicted RBP	11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	DSN1	Q9H410	356 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	CRIM1	Q9NZV1	1036 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	MED11	Q9P086	117 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	MID2	Q9UJV3	735 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	CBLC	Q9ULV8	474 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	DOCK7	Q96N67	2140 aa		11.63	□□□□□ -0.55
NR1I3-225	ENST00000508387	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	CD8B2	A6NJW9	211 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	CLCA1	A8K7I4	914 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	SHISA8	B8ZZ34	492 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387		H3BQF6	201 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	EEF1E1	O43324	174 aa	Known RBP	11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	ZIC3	O60481	467 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	ABCB7	O75027	752 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	SKAP2	O75563	359 aa	Predicted RBP	11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	ACTL6A	O96019	429 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	IL2RA	P01589	272 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	ACP2	P11117	423 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	SRD5A2	P31213	254 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	TIMP3	P35625	211 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	ASCL1	P50553	236 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	CLDN18	P56856	261 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	NAA20	P61599	178 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	IFFO1	Q0D2I5	559 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	PDE7A	Q13946	482 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	SZRD1	Q7Z422	152 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	MARCH3	Q86UD3	253 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	GCNT2	Q8N0V5	402 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	CLYBL	Q8N0X4	340 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	RIBC1	Q8N443	379 aa	Predicted RBP	11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	FADS6	Q8N9I5	356 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	OR2M3	Q8NG83	312 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	OR4K17	Q8NGC6	315 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	PPCDC	Q96CD2	204 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	GIMAP5	Q96F15	307 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	RMND5B	Q96G75	393 aa	Predicted RBP	11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	SFXN2	Q96NB2	322 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	LMF2	Q9BU23	707 aa	Known RBP	11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	C1orf50	Q9BV19	199 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	LIME1	Q9H400	295 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	REEP4	Q9H6H4	257 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	SH3BP4	Q9P0V3	963 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	PPP4R1L	Q9P1A2	415 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	CLCF1	Q9UBD9	225 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	KCNN3	Q9UGI6	736 aa		11.62	□□□□□ -0.55
NR1I3-225	ENST00000508387	POLQ	O75417	2590 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	PCNX3	Q9H6A9	2034 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	DVL2	O14641	736 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	NPHS1	O60500	1241 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	PEX11A	O75192	247 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	LYPLA1	O75608	230 aa	Predicted RBP	11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	IL33	O95760	270 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	NEFH	P12036	1026 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	BCKDHA	P12694	445 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	DPP4	P27487	766 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	GABRA3	P34903	492 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	GPC1	P35052	558 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	FRK	P42685	505 aa	Predicted RBP	11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	RNF144A	P50876	292 aa	Predicted RBP	11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	PRKAG1	P54619	331 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	CLDN15	P56746	228 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	GRAMD1B	Q3KR37	738 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	XKR7	Q5GH72	579 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	RNF165	Q6ZSG1	346 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	ADGRE4P	Q86SQ3	457 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	UBQLNL	Q8IYU4	475 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	GATS	Q8NAP1	163 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	OR7A2P	Q8NGA2	310 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	ZPLD1	Q8TCW7	415 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	CAVIN3	Q969G5	261 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	C16orf58	Q96GQ5	468 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	NPAS1	Q99742	590 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	GPATCH1	Q9BRR8	931 aa	Known RBP	11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	YIPF4	Q9BSR8	244 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387		Q9N2J8	555 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	SIRT3	Q9NTG7	399 aa	Predicted RBP	11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	FBXO34	Q9NWN3	711 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	ZDHHC2	Q9UIJ5	367 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	TRAF6	Q9Y4K3	522 aa		11.61	□□□□□ -0.55
NR1I3-225	ENST00000508387	CREBBP	Q92793	2442 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	FAM47E-STBD1	D6RA91	191 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	ITM2A	O43736	263 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	TYROBP	O43914	113 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	ZWINT	O95229	277 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	SLU7	O95391	586 aa	Known RBP	11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	UTS2	O95399	124 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	TGM6	O95932	706 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	CPN1	P15169	458 aa		11.6	□□□□□ -0.55
NR1I3-225	ENST00000508387	ZNF708	P17019	499 aa		11.6	□□□□□ -0.55

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