RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 LARP4Q71RC2 724 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPN20-216ENST00000506080 FAM214BQ7L5A3 538 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 GOLGA7Q7Z5G4 137 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 KLHL7Q8IXQ5 586 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 RAB3IL1Q8TBN0 382 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 CDKL2Q92772 493 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 NXNL1Q96CM4 212 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 ZBED6CLQ96FA7 236 aaPredicted RBP8.25□□□□□ -1.09
PTPN20-216ENST00000506080 SLC35A4Q96G79 324 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 SERPINI1Q99574 410 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 CPNE1Q99829 537 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 MRPL1Q9BYD6 325 aaKnown RBP8.25□□□□□ -1.09
PTPN20-216ENST00000506080 NMRAL1Q9HBL8 299 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 PRODH2Q9UF12 536 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 CES1P1Q9UKY3 287 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 ZNF337Q9Y3M9 751 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 ABCA1O95477 2261 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 NBEAL1Q6ZS30 2694 aa8.25□□□□□ -1.09
PTPN20-216ENST00000506080 A8MV72 311 aaPredicted RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 E7ESA3 106 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 FOXE1O00358 373 aaPredicted RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 TO15178 435 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 TP73O15350 636 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 SCO2O43819 266 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 TSPAN2O60636 221 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 ADAM11O75078 769 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 AQP8O94778 261 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 SEC31AO94979 1220 aaKnown RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 ATP1B1P05026 303 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 SOD3P08294 240 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 LTA4HP09960 611 aaKnown RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 GFAPP14136 432 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 PPP3CBP16298 524 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 CSNK2A2P19784 350 aaPredicted RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 IL12BP29460 328 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 KRT20P35900 424 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 GP5P40197 560 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 MAPK12P53778 367 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 GAS1P54826 345 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 CLDN20P56880 219 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 CORO7P57737 925 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 DR1Q01658 176 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 ILF2Q12905 390 aaKnown RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 GTF2H2Q13888 395 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 FGFBP1Q14512 234 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 SLMAPQ14BN4 828 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 GUSBP1Q15486 140 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 PFKFB4Q16877 469 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 GTF2H2CQ6P1K8 395 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 TBC1D1Q86TI0 1168 aaPredicted RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 CTAGE3PQ8IX95 158 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 SLC35F6Q8N357 371 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 L3MBTL4Q8NA19 623 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 PYROXD1Q8WU10 500 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 EFHD2Q96C19 240 aaPredicted RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 KLHL29Q96CT2 875 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 TMEM204Q9BSN7 226 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 SLCO5A1Q9H2Y9 848 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 IPPKQ9H8X2 491 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 MED11Q9P086 117 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 PPP4R1LQ9P1A2 415 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 GPR55Q9Y2T6 319 aaPredicted RBP8.24□□□□□ -1.09
PTPN20-216ENST00000506080 ZNF175Q9Y473 711 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 PCDHA9Q9Y5H5 950 aa8.24□□□□□ -1.09
PTPN20-216ENST00000506080 C1orf226A1L170 272 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 SYCE1LA8MT33 242 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 OVOL3O00110 214 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 CLOCKO15516 846 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 UGDHO60701 494 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 NDUFS7O75251 213 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 SEMA3DO95025 777 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 SIX3O95343 332 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-216ENST00000506080 SPRP35270 261 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-216ENST00000506080 SLC6A8P48029 635 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 ALDH9A1P49189 494 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 FAPQ12884 760 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 STX5Q13190 355 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 EFR3AQ14156 821 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 ETFDHQ16134 617 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 SGCBQ16585 318 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 CTU2Q2VPK5 515 aaKnown RBP8.23□□□□□ -1.09
PTPN20-216ENST00000506080 KRTAP24-1Q3LI83 254 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 SGO1Q5FBB7 561 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 TTC19Q6DKK2 380 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-216ENST00000506080 NPSR1Q6W5P4 371 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 PAGE2Q7Z2X7 111 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 Q8N3U1 123 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 GBP7Q8N8V2 638 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-216ENST00000506080 FADS6Q8N9I5 356 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 OR2M3Q8NG83 312 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 OR4N2Q8NGD1 307 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 LILRB1Q8NHL6 650 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-216ENST00000506080 KCTD4Q8WVF5 259 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 KAT2AQ92830 837 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 NEUROG1Q92886 237 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 FBXW5Q969U6 566 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 ATP6V1E2Q96A05 226 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 CNRIP1Q96F85 164 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-216ENST00000506080 LRRC1Q9BTT6 524 aa8.23□□□□□ -1.09
PTPN20-216ENST00000506080 PRRG4Q9BZD6 226 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms