RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 IGHV4-30-4P0DP06 118 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 IGHV4-31P0DP07 118 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 CCNB1P14635 433 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 WT1P19544 449 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 CCNOP22674 350 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 GLRA1P23415 457 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 CDH5P33151 784 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 UGT1A5P35504 534 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC1A2P43004 574 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 AMTP48728 403 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PSMD4P55036 377 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 B3GALT5-AS1P59052 145 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 DCDC1P59894 354 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF155Q12901 538 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 GAGE1Q13065 139 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 GAGE4Q13068 117 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 CRMP1Q14194 572 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 ATXN7L3Q14CW9 347 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 UBE2V2Q15819 145 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 MRPL23Q16540 153 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 SGSM1Q2NKQ1 1148 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PRTGQ2VWP7 1150 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 TEX44Q53QW1 395 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC25A53Q5H9E4 307 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PLPP4Q5VZY2 271 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PAPD7Q5XG87 772 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF562Q6V9R5 426 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 TRMT10CQ7L0Y3 403 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 ITIH5Q86UX2 942 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 CATSPERDQ86XM0 798 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 LDLRAD3Q86YD5 345 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PLD3Q8IV08 490 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 ERI1Q8IV48 349 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 GPC2Q8N158 579 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 SPEM1Q8N4L4 309 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 MAPKAPK5-AS1Q8N8E1 139 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 KBTBD3Q8NAB2 608 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 SMRP1Q8NCR6 262 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR4F17Q8NGA8 305 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR4A15Q8NGL6 344 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR4F5Q8NH21 305 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PRSS3P2Q8NHM4 247 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 FBXO25Q8TCJ0 367 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PAQR8Q8TEZ7 354 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 SMG7Q92540 1137 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PNPLA2Q96AD5 504 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 RTP4Q96DX8 246 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 TM4SF19Q96DZ7 209 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 SERAC1Q96JX3 654 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 C10orf90Q96M02 699 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF578Q96N58 590 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR4F4Q96R69 305 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 IL4I1Q96RQ9 567 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 CYTH2Q99418 400 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PSD2Q9BQI7 771 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 LZTS2Q9BRK4 669 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 FUCA2Q9BTY2 467 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 RPP25Q9BUL9 199 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 GAL3ST2Q9H3Q3 398 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 AZI2Q9H6S1 392 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PLAC1Q9HBJ0 212 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 MAN2C1Q9NTJ4 1040 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 DCAF13Q9NV06 445 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 LYARQ9NX58 379 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 IL36GQ9NZH8 169 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 BFARQ9NZS9 450 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 EIF3KQ9UBQ5 218 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 RALYQ9UKM9 306 aaKnown RBP3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 PRDM4Q9UKN5 801 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 RNF24Q9Y225 148 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 STARD10Q9Y365 291 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 WIPI2Q9Y4P8 454 aa3.24□□□□□ -1.89
HMGB1P22-201ENST00000505315 WDR33Q9C0J8 1336 aaKnown RBP3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 A0A087WZ39 114 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 LRIT2A6NDA9 550 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF840PA6NDX5 716 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 C5orf60A6NFR6 353 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 SRRM4A7MD48 611 aaKnown RBP3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 C2CD4DB7Z1M9 353 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 NPIPA7E9PJI5 369 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 DLGAP1O14490 977 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR7A17O14581 309 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 RGS16O15492 202 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 RS1O15537 224 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 P2RX6O15547 441 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 RGS14O43566 566 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 SPRY3O43610 288 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 ATP5LO75964 103 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 SOX30O94993 753 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 OAZ2O95190 189 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 CAVIN2O95810 425 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 IGHA1P01876 353 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 NR3C1P04150 777 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 NPIPA8P0DM63 369 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 H2AFXP16104 143 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 EFNA1P20827 205 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 IMPDH1P20839 514 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 AADACP22760 399 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 GIFP27352 417 aa3.23□□□□□ -1.89
HMGB1P22-201ENST00000505315 GNA11P29992 359 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms