RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 DIO2Q92813 273 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 HGDQ93099 445 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 COL21A1Q96P44 957 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 OR7D2Q96RA2 312 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 HES7Q9BYE0 225 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 MYLK2Q9H1R3 596 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 SERHL2Q9H4I8 314 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 KLHL1Q9NR64 748 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 SACM1LQ9NTJ5 587 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 RALYQ9UKM9 306 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 CNOT11Q9UKZ1 510 aaKnown RBP10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PCDHB14Q9Y5E9 798 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 PCDHGB3Q9Y5G1 929 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 GMEB1Q9Y692 573 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 CAPN7Q9Y6W3 813 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 NBASA2RRP1 2371 aa10.94□□□□□ -0.66
PDLIM5-208ENST00000504489 TRBV5-3A0A0A0MS03 114 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 B8ZZF3 427 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 KLRC4-KLRK1H3BQV0 150 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 ANGPT2O15123 496 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 SUV39H1O43463 412 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 ASNA1O43681 348 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 UGT2B11O75310 529 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 C1QL1O75973 258 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 KCNK2O95069 426 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 AGR2O95994 175 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 PRB1P04280 392 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 CNR1P21554 472 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 IL12BP29460 328 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 LCN1P31025 176 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 ANXA11P50995 505 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 PSMD4P55036 377 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 RPS26P62854 115 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 POU6F2P78424 691 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 COQ5Q5HYK3 327 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 TBCELQ5QJ74 424 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 DLEU7Q6UYE1 221 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 DNAJC14Q6Y2X3 702 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 SULF2Q8IWU5 870 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 ANKS4BQ8N8V4 417 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 FAM98AQ8NCA5 519 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 OR5M3Q8NGP4 307 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 RNF138Q8WVD3 245 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 CDS1Q92903 461 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 NTNG2Q96CW9 530 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 TMCO6Q96DC7 493 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 RMND5BQ96G75 393 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 ADOQ96SZ5 270 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 USB1Q9BQ65 265 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 CCDC106Q9BWC9 280 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 OR51I1Q9H343 314 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 TPT1P8Q9HAU6 139 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 PROK2Q9HC23 129 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 SLAMF8Q9P0V8 285 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 LUZP4Q9P127 313 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 ARMCX1Q9P291 453 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 KCNE3Q9Y6H6 103 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 ARHGAP21Q5T5U3 1957 aa10.93□□□□□ -0.66
PDLIM5-208ENST00000504489 CFAP46Q8IYW2 2715 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 BBIP1A8MTZ0 92 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 CLIC1O00299 241 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 FBP2O00757 339 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 PEX1O43933 1283 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 RASAL1O95294 804 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 AK1P00568 194 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 IGKV1D-16P01601 117 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 C1QCP02747 245 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 CYP4B1P13584 511 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 PPIBP23284 216 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 CASP3P42574 277 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 KHKP50053 298 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 MVDP53602 400 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 STX5Q13190 355 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 SNTA1Q13424 505 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 GTDC1Q4AE62 458 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 COLEC12Q5KU26 742 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 ATAD3BQ5T9A4 648 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 GKAP1Q5VSY0 366 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 AP1ARQ63HQ0 302 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 HEPHL1Q6MZM0 1159 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 RETREG3Q86VR2 466 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 SNX32Q86XE0 403 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 RNF130Q86XS8 419 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 MSRB3Q8IXL7 192 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 ZFP62Q8NB50 900 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 POGLUT1Q8NBL1 392 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 CHDHQ8NE62 594 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 OR2M7Q8NG81 312 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 OR52N2Q8NGI0 321 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 OR5D16Q8NGK9 328 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 RP9Q8TA86 221 aaKnown RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 EFHD2Q96C19 240 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 OTUB1Q96FW1 271 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 AURKBQ96GD4 344 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 NODALQ96S42 347 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 FAM173AQ9BQD7 235 aa10.92□□□□□ -0.66
PDLIM5-208ENST00000504489 G6PC3Q9BUM1 346 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms