RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	CHRNE	Q04844	493 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	IL10RA	Q13651	578 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	GNA13	Q14344	377 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNHIT3	Q15649	155 aa	Predicted RBP	11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	LRRC23	Q53EV4	343 aa	Predicted RBP	11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	TYW3	Q6IPR3	259 aa	Known RBP	11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	ZFP1	Q6P2D0	407 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	ENPP6	Q6UWR7	440 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	C10orf67	Q8IYJ2	551 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	OR4N2	Q8NGD1	307 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	NUBPL	Q8TB37	319 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	GPR151	Q8TDV0	419 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	ELP5	Q8TE02	316 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	SLC26A7	Q8TE54	656 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	APOBEC4	Q8WW27	367 aa	Known RBP	11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	PYDC1	Q8WXC3	89 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	NXF5	Q9H1B4	397 aa	Known RBP	11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	POLE3	Q9NRF9	147 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	THSD1	Q9NS62	852 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	ARMC1	Q9NVT9	282 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	FBXO34	Q9NWN3	711 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	COPS7A	Q9UBW8	275 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	ANAPC2	Q9UJX6	822 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	KLK13	Q9UKR3	277 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	PCDHGB3	Q9Y5G1	929 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	PIEZO1	Q92508	2521 aa		11.24	□□□□□ -0.61
MATR3-231	ENST00000502394	CFAP54	Q96N23	3096 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	TMEM247	A6NEH6	219 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	C5orf58	C9J3I9	102 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	NPIPB9	F8W1W9	429 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	KIAA0513	O60268	411 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	FCMR	O60667	390 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	PDE9A	O76083	593 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	PRKD3	O94806	890 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	ATP6V1G2	O95670	118 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	MAGEA2	P43356	314 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	RNF4	P78317	190 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	CYP27C1	Q4G0S4	372 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	IQCC	Q4KMZ1	466 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	GPAT3	Q53EU6	434 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	CYBRD1	Q53TN4	286 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	CCNJ	Q5T5M9	372 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	PLAG1	Q6DJT9	500 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	NDUFAF7	Q7L592	441 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	SLC29A4	Q7RTT9	530 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	C16orf62	Q7Z3J2	963 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	ZAR1	Q86SH2	424 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	GPR32P1	Q8NGA4	272 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	M1AP	Q8TC57	530 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	PMM1	Q92871	262 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	TP53INP1	Q96A56	240 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	PYURF	Q96I23	114 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	RSRC1	Q96IZ7	334 aa	Known RBP	11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	LCOR	Q96JN0	433 aa	Predicted RBP	11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	MAGIX	Q9H6Y5	334 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	DCLRE1B	Q9H816	532 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	RNPEPL1	Q9HAU8	725 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394		Q9N2J8	555 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	MMP25	Q9NPA2	562 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	IL17B	Q9UHF5	180 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	KCND3	Q9UK17	655 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	RPS6KA6	Q9UK32	745 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	CBLC	Q9ULV8	474 aa		11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	SAMD4A	Q9UPU9	718 aa	Known RBP	11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	MRPS18B	Q9Y676	258 aa	Known RBP	11.23	□□□□□ -0.61
MATR3-231	ENST00000502394	C2orf92	A0A1B0GVN3	265 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	TRABD2B	A6NFA1	517 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	PRAMEF25	A6NGN4	478 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	ACOX3	O15254	700 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	STX11	O75558	287 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	NADK	O95544	446 aa	Predicted RBP	11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	EPPIN	O95925	133 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	OPN1SW	P03999	348 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	KCNJ5	P48544	419 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	SELENOW	P63302	87 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	KCNJ10	P78508	379 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	RCN1	Q15293	331 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	TGIF1	Q15583	401 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	EXT1	Q16394	746 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	TBC1D25	Q3MII6	688 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	FBXW10	Q5XX13	1052 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	FIGNL1	Q6PIW4	674 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	HSDL2	Q6YN16	418 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	TSEN54	Q7Z6J9	526 aa	Known RBP	11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	VTCN1	Q7Z7D3	282 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	MRGPRE	Q86SM8	312 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	ARMC10	Q8N2F6	343 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNF619	Q8N2I2	560 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	BCORP1	Q8N888	145 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	STMN2	Q93045	179 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	ZG16B	Q96DA0	208 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	NXPE2	Q96DL1	559 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	HSPBAP1	Q96EW2	488 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	RMND5B	Q96G75	393 aa	Predicted RBP	11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	HSH2D	Q96JZ2	352 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	COL21A1	Q96P44	957 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	LMF1	Q96S06	567 aa		11.22	□□□□□ -0.61
MATR3-231	ENST00000502394	ZNF607	Q96SK3	696 aa		11.22	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms