RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RAB11BQ15907 218 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZSWIM7Q19AV6 140 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 GGTA1PQ4G0N0 100 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC9C1Q4G0N8 1177 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAB6CQ53S08 254 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SLC25A53Q5H9E4 307 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 LIPNQ5VXI9 398 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 KCTD18Q6PI47 426 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF793Q6ZN11 406 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 DPY19L4Q7Z388 723 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 C5orf24Q7Z6I8 188 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 PATL1Q86TB9 770 aaKnown RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 LINC00523Q86TU6 105 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 PARGQ86W56 976 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ADHFE1Q8IWW8 467 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 CCDC65Q8IXS2 484 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 LMNTD1Q8N9Z9 388 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF548Q8NEK5 533 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 DDHD1Q8NEL9 900 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 OR11H4Q8NGC9 324 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 NDNFQ8TB73 568 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 M1APQ8TC57 530 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ACER1Q8TDN7 264 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ACMSDQ8TDX5 336 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RNF128Q8TEB7 428 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SDR42E1Q8WUS8 393 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAB1CQ92928 201 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HIST1H2ACQ93077 130 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 TSACCQ96A04 125 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SARAFQ96BY9 339 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 TM4SF19Q96DZ7 209 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ZNF333Q96JL9 665 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RITA1Q96K30 269 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 APOLD1Q96LR9 279 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 TSNARE1Q96NA8 513 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 CYTH2Q99418 400 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 TIMP4Q99727 224 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SH3GL1Q99961 368 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 OMDQ99983 421 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 NDUFAF3Q9BU61 184 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 TEKT3Q9BXF9 490 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ROGDIQ9GZN7 287 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPRTNQ9H040 489 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 NSRP1Q9H0G5 558 aaKnown RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RAB6CQ9H0N0 254 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RHOJQ9H4E5 214 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 KAT8Q9H7Z6 458 aaKnown RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 LY9Q9HBG7 655 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SPAG4Q9NPE6 437 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SMOXQ9NWM0 555 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 MTCH1Q9NZJ7 389 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HACD3Q9P035 362 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 PIPOXQ9P0Z9 390 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 EPHA6Q9UF33 1036 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 CD300AQ9UGN4 299 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 DAPK2Q9UIK4 370 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 PILRAQ9UKJ1 303 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 ADAM28Q9UKQ2 775 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 EMCNQ9ULC0 261 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 CA5BQ9Y2D0 317 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 KLHDC2Q9Y2U9 406 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 INSL6Q9Y581 213 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 HS3ST3A1Q9Y663 406 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 RBBP6Q7Z6E9 1792 aaKnown RBP3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 EYSQ5T1H1 3165 aa3.91□□□□□ -1.78
HMGB1P21-201ENST00000502313 SH3PXD2BA1X283 911 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 E9PMD0 336 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 F8VZ95 297 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 I6L893 689 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 SGK494L7N484 410 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 PDHXO00330 501 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF197O14709 1029 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 POLR1CO15160 346 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 HSPA12AO43301 675 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 NARSO43776 548 aaKnown RBP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 NDUFS6O75380 124 aaKnown RBP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 CBR3O75828 277 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 KLHL2O95198 593 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 CST1P01037 141 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 CALCAP01258 141 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 OPN1LWP04000 364 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 CRYGBP07316 175 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 APRTP07741 180 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 GSTT2P0CG29 244 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 GSTT2BP0CG30 244 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 GP9P14770 177 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 WT1P19544 449 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 CASP14P31944 242 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 CSTF2P33240 577 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 AVPR1AP37288 418 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 MNDAP41218 407 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 PPP1R2P41236 205 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 ACADSBP45954 432 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 HAAOP46952 286 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 RAB9AP51151 201 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 VAMP7P51809 220 aa3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 MAZP56270 477 aaKnown RBP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 PPIAP62937 165 aaKnown RBP3.9□□□□□ -1.79
HMGB1P21-201ENST00000502313 NAAAQ02083 359 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms