RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CA5BQ9Y2D0 317 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 CMAHPQ9Y471 501 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 MYO9BQ13459 2157 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 ARHGEF17Q96PE2 2063 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-204ENST00000501271 CENPVL1A0A0U1RR11 272 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 SLC35F4A4IF30 521 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 DNAJB6O75190 326 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 CCNYL3P0C7X3 344 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 PRKAR1BP31321 381 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 SDC2P34741 201 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 SOX18P35713 384 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 IFNGR2P38484 337 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 NKX2-5P52952 324 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-204ENST00000501271 RGS8P57771 180 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-204ENST00000501271 ITPRIPL2Q3MIP1 535 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 PLK5Q496M5 336 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 TMEM196Q5HYL7 178 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 HEPHL1Q6MZM0 1159 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 MFSD12Q6NUT3 480 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 PLEKHM3Q6ZWE6 761 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 MTSS1LQ765P7 747 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 GDF7Q7Z4P5 450 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 CCL4L1Q8NHW4 92 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 PIGXQ8TBF5 258 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 ZCCHC10Q8TBK6 192 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 ADAMTS15Q8TE58 950 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 TMEM255BQ8WV15 326 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 NEDD4LQ96PU5 975 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 SLC38A2Q96QD8 506 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 ABCB9Q9NP78 766 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 OR6C2Q9NZP2 312 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 IL20RAQ9UHF4 553 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 COLEC10Q9Y6Z7 277 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 F5P12259 2224 aa9.22□□□□□ -0.93
CLIP1-204ENST00000501271 USP34Q70CQ2 3546 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 H0Y8X5 98 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 SURF4O15260 269 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 P2RX6O15547 441 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 DYRK3O43781 588 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 LALBAP00709 142 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 COL9A1P20849 921 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 RFX2P48378 723 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 CDH11P55287 796 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 FABP5Q01469 135 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 TNFRSF17Q02223 184 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 TPBGQ13641 420 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 FAM214AQ32MH5 1076 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 NXNL2Q5VZ03 156 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 TYW3Q6IPR3 259 aaKnown RBP9.21□□□□□ -0.93
CLIP1-204ENST00000501271 QSOX2Q6ZRP7 698 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 NUDT18Q6ZVK8 323 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 RRM2BQ7LG56 351 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 ASPGQ86U10 573 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 LHFPL3Q86UP9 236 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 OR4N5Q8IXE1 308 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 NRMQ8IXM6 262 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 SHISA5Q8N114 240 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 GJD3Q8N144 294 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 LRRC25Q8N386 305 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-204ENST00000501271 POGLUT1Q8NBL1 392 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF485Q8NCK3 441 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 OR4F15Q8NGB8 312 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 CHAC2Q8WUX2 184 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 ACOT11Q8WXI4 607 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-204ENST00000501271 OR1E3Q8WZA6 343 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 NR4A3Q92570 626 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 TMCO6Q96DC7 493 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 MSLNLQ96KJ4 702 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 MS4A4EQ96PG1 132 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 MCHR1Q99705 422 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 C1QTNF7Q9BXJ2 289 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 ANKRD19PQ9H560 264 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 TIGARQ9NQ88 270 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 WBP1LQ9NX94 342 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF624Q9P2J8 865 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-204ENST00000501271 ZNF443Q9Y2A4 671 aaPredicted RBP9.21□□□□□ -0.93
CLIP1-204ENST00000501271 HEBP2Q9Y5Z4 205 aa9.21□□□□□ -0.93
CLIP1-204ENST00000501271 EYSQ5T1H1 3165 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 TRBV23OR9-2A0A075B6M9 112 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 A0A1W2PQ09 198 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 A0A1W2PQL4 384 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-204ENST00000501271 IRGMA1A4Y4 181 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 SNTNA6NMZ2 147 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 AP3D1O14617 1153 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 KLF4O43474 513 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 IL7P13232 177 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 FPR3P25089 353 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 RPS15AP62244 130 aaKnown RBP9.21□□□□□ -0.94
CLIP1-204ENST00000501271 SIM1P81133 766 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-204ENST00000501271 DECR1Q16698 335 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 PUS10Q3MIT2 529 aaKnown RBP9.21□□□□□ -0.94
CLIP1-204ENST00000501271 GLYR1Q49A26 553 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-204ENST00000501271 CRTC2Q53ET0 693 aaPredicted RBP9.21□□□□□ -0.94
CLIP1-204ENST00000501271 AGAP6Q5VW22 663 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 CDC73Q6P1J9 531 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 ZNF836Q6ZNA1 936 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 RD3Q7Z3Z2 195 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 UBE2Q1Q7Z7E8 422 aa9.21□□□□□ -0.94
CLIP1-204ENST00000501271 CLDN22Q8N7P3 220 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms