RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 G3V3Y1 287 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 H3BTX0 84 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 ALOX15BO15296 676 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 LCMT2O60294 686 aaKnown RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 TSC22D2O75157 780 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 TOM1L1O75674 476 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 PRAMEF12O95522 483 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 ARF4P18085 180 aaPredicted RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 PAICSP22234 425 aaKnown RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 IGFBP5P24593 272 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 IL2RGP31785 369 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 MAGEA9P43362 315 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 OR1D4P47884 311 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 RPL34P49207 117 aaKnown RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 STK19P49842 368 aaPredicted RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 RPS6P62753 249 aaKnown RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 PPIAP62937 165 aaKnown RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 CXCL6P80162 114 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 TFDP1Q14186 410 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 UBE2V2Q15819 145 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 TMEM52BQ4KMG9 183 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 ATAD3CQ5T2N8 411 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 C12orf60Q5U649 245 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 SLX4IPQ5VYV7 408 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 BTNL3Q6UXE8 466 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 PP632Q6XCG6 107 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 GCNT7Q6ZNI0 430 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 CD177Q8N6Q3 437 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 ANKRD20A12PQ8NF67 263 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 UBE2Q2Q8WVN8 375 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 GTSF1Q8WW33 167 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 PPP1R16AQ96I34 528 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 C9orf85Q96MD7 179 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 HCAR1Q9BXC0 346 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 CCSER1Q9C0I3 900 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 VAT1LQ9HCJ6 419 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.78□□□□□ -2.12
RBM39-242ENST00000498280 C1orf123Q9NWV4 160 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 KLRF1Q9NZS2 232 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 ATXN10Q9UBB4 475 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 ABCD2Q9UBJ2 740 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 SLC2A6Q9UGQ3 507 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 BARX2Q9UMQ3 279 aaPredicted RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 DUSP12Q9UNI6 340 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 MGAT4BQ9UQ53 548 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 DHRS7Q9Y394 339 aa1.78□□□□□ -2.12
RBM39-242ENST00000498280 EXOSC1Q9Y3B2 195 aaKnown RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.78□□□□□ -2.12
RBM39-242ENST00000498280 NCAPD2Q15021 1401 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PARD3Q8TEW0 1356 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 ATP8B3O60423 1300 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 TRBV7-9A0A0J9YWB2 115 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 RGSL1A5PLK6 1076 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 LRRC30A6NM36 301 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 WASHC1A8K0Z3 465 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 A8MX80 341 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 WASH3PC4AMC7 463 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 F8WDY8 70 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 CASKO14936 926 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 CHADO15335 359 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PPIHO43447 177 aaKnown RBP1.77□□□□□ -2.13
RBM39-242ENST00000498280 VPS26AO75436 327 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 SCGB2A1O75556 95 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 B3GALNT1O75752 331 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 TRIM16O95361 564 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 GJB5O95377 273 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 SLC2A10O95528 541 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PRB2P02812 416 aaPredicted RBP1.77□□□□□ -2.13
RBM39-242ENST00000498280 IGFBP1P08833 259 aaPredicted RBP1.77□□□□□ -2.13
RBM39-242ENST00000498280 GIG44P09565 113 aaPredicted RBP1.77□□□□□ -2.13
RBM39-242ENST00000498280 CT45A10P0DMU9 189 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PGAM2P15259 253 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 SDC1P18827 310 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 ZBTB25P24278 435 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 FASP25445 335 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PTBP1P26599 531 aaKnown RBP eCLIP1.77□□□□□ -2.13
RBM39-242ENST00000498280 CCND2P30279 289 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 ADRA1AP35348 466 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 CYLC1P35663 651 aaPredicted RBP1.77□□□□□ -2.13
RBM39-242ENST00000498280 ACVR1BP36896 505 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PTGFRP43088 359 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 ALDH3B2P48448 385 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 METAP1P53582 386 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 ERVPABLB-1P60509 514 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 NDPQ00604 133 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PLOD1Q02809 727 aaPredicted RBP1.77□□□□□ -2.13
RBM39-242ENST00000498280 HSF2Q03933 536 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PUDPQ08623 228 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 IL18R1Q13478 541 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 CDKN3Q16667 212 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 LGSNQ5TDP6 509 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 MARC1Q5VT66 337 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 ZNF57Q68EA5 555 aaPredicted RBP1.77□□□□□ -2.13
RBM39-242ENST00000498280 CGB2Q6NT52 195 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 VITQ6UXI7 678 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 WASH2PQ6VEQ5 465 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 LHFPL4Q7Z7J7 247 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 PARGQ86W56 976 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 ERICH1Q86X53 443 aa1.77□□□□□ -2.13
RBM39-242ENST00000498280 MISPQ8IVT2 679 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms