RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CCDC166P0CW27 439 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 SMIM18P0DKX4 95 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 HSPA8P11142 646 aaKnown RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 UMPSP11172 480 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 ZNF26P17031 533 aaPredicted RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 EIF2DP41214 584 aaKnown RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 ALDH3B2P48448 385 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CD151P48509 253 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 NDST2P52849 883 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 PDX1P52945 283 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 AQP4P55087 323 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CDH11P55287 796 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 HERV-K104P61576 105 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 FOLH1Q04609 750 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 LGALS3BPQ08380 585 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 ADIGQ0VDE8 80 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 PNRC1Q12796 327 aaPredicted RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 TEAD2Q15562 447 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 SMU1Q2TAY7 513 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CNPY1Q3B7I2 92 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 KRTAP27-1Q3LI81 207 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 RWDD4Q6NW29 188 aaKnown RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 ZCCHC23Q6ZST2 131 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 RAPH1Q70E73 1250 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 FAM131BQ86XD5 332 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 HPS6Q86YV9 775 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CROCCP3Q8IVE0 287 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 LSMEM2Q8N112 164 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 MINDY1Q8N5J2 469 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 ZNF781Q8N8C0 355 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 ANKFN1Q8N957 763 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 DNAAF3Q8N9W5 541 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 OR52E4Q8NGH9 312 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 ZNF420Q8TAQ5 688 aaPredicted RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 RNF128Q8TEB7 428 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 NAT14Q8WUY8 206 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 SGF29Q96ES7 293 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CPB2Q96IY4 423 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 RDH12Q96NR8 316 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 MS4A10Q96PG2 267 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 PKMYT1Q99640 499 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 GPATCH1Q9BRR8 931 aaKnown RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 OSBPL10Q9BXB5 764 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 TRIM15Q9C019 465 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 ARRDC1-AS1Q9H2J1 176 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 MFSD1Q9H3U5 465 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 WDR41Q9HAD4 459 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 PALMDQ9NP74 551 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.29□□□□□ -1.72
SSR3-209ENST00000498205 MBNL1Q9NR56 388 aaKnown RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 ABCC13Q9NSE7 274 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 PNPLA3Q9NST1 481 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 FAM49BQ9NUQ9 324 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 INTS10Q9NVR2 710 aaKnown RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 COMMD8Q9NX08 183 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 SPHK1Q9NYA1 384 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 IL37Q9NZH6 218 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 TMEM9Q9P0T7 183 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 TMEM181Q9P2C4 612 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 ATXN10Q9UBB4 475 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 MARCOQ9UEW3 520 aaPredicted RBP4.29□□□□□ -1.72
SSR3-209ENST00000498205 OR12D3Q9UGF7 316 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 TUBGCP4Q9UGJ1 667 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CD300AQ9UGN4 299 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 IL17BQ9UHF5 180 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 CDH7Q9ULB5 785 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 AP3M1Q9Y2T2 418 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 NDUFAF1Q9Y375 327 aa4.29□□□□□ -1.72
SSR3-209ENST00000498205 IGLV3-10A0A075B6K4 115 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 IGLV9-49A0A0B4J1Y8 123 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CXorf51AA0A1B0GTR3 108 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 FAM170AA1A519 330 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SDHDO14521 159 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 PTGESO14684 152 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 LYPLA1O75608 230 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 PIAS1O75925 651 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SUPT7LO94864 414 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 H6PDO95479 791 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 STAMBPO95630 424 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 GPIP06744 558 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 FAM58BPP0C7Q3 252 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SMIM10L2AP0DMW4 78 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 SMIM10L2BP0DMW5 78 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 NCF2P19878 526 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 HLA-DPA1P20036 260 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 OGNP20774 298 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 EFNA1P20827 205 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 IMPDH1P20839 514 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CA6P23280 308 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 LMO2P25791 158 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CCR1P32246 355 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 NUDT2P50583 147 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 HNRNPFP52597 415 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 NAGLUP54802 743 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 ADARP55265 1226 aaKnown RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 YBEYP58557 167 aaPredicted RBP4.28□□□□□ -1.72
SSR3-209ENST00000498205 ATP6V0D1P61421 351 aa4.28□□□□□ -1.72
SSR3-209ENST00000498205 CX3CL1P78423 397 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms