RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 ACHEP22303 614 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 DNAJB1P25685 340 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GCAP28676 217 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CRABP2P29373 138 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CCND2P30279 289 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 OXTRP30559 389 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 MC5RP33032 325 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 RPA3P35244 121 aaPredicted RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 COPB2P35606 906 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CDKN2BP42772 138 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 NAMPTP43490 491 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 HSPA13P48723 471 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CCNHP51946 323 aaPredicted RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 PEX3P56589 373 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ACTR3P61158 418 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 NOP14P78316 857 aaKnown RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ZFP36L1Q07352 338 aaKnown RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ASPHQ12797 758 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 COG2Q14746 738 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 RCN1Q15293 331 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 MAPK6Q16659 721 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 KYAT1Q16773 422 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 USH1GQ495M9 461 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ATP1A1-AS1Q5TC04 95 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ARMC3Q5W041 872 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CST9LP1Q5W188 147 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 OR52E8Q6IFG1 317 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 DNAJC24Q6P3W2 148 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 TIFABQ6ZNK6 161 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 FAM47EQ6ZV65 393 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CPEB2Q7Z5Q1 589 aaKnown RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 LCA5Q86VQ0 697 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SLC26A11Q86WA9 606 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 WDR49Q8IV35 697 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ZBED8Q8IZ13 594 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SLC22A15Q8IZD6 547 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 KIF2BQ8N4N8 673 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CERS5Q8N5B7 392 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 NAT8LQ8N9F0 302 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 DRAXINQ8NBI3 349 aaPredicted RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 FAM151AQ8WW52 585 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 PRCCQ92733 491 aaPredicted RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SPSB1Q96BD6 273 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GBP5Q96PP8 586 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 CBWD1Q9BRT8 395 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 NAT9Q9BTE0 207 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 TRIM4Q9C037 500 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 LHX5Q9H2C1 402 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 VPS37BQ9H9H4 285 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 MRPL40Q9NQ50 206 aaKnown RBP3.3□□□□□ -1.88
TRIM4-205ENST00000496896 NMRK1Q9NWW6 199 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 TBK1Q9UHD2 729 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 PILRBQ9UKJ0 227 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 TMCO1Q9UM00 188 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 GMEB1Q9Y692 573 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 ANKRD31Q8N7Z5 1873 aa3.3□□□□□ -1.88
TRIM4-205ENST00000496896 SGK1O00141 431 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 CCL24O00175 119 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 COPEO14579 308 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 CASQ2O14958 399 aaPredicted RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 SLC16A4O15374 487 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 SNNO75324 88 aaPredicted RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 TADA2AO75478 443 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 MTRF1O75570 445 aaKnown RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 ASS1P00966 412 aaKnown RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 IGKV3-15P01624 115 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 HLA-DRAP01903 254 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 FYNP06241 537 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 YES1P07947 543 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 PABPC4LP0CB38 370 aaKnown RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 MLNP12872 115 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 BCL3P20749 454 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 GLRA2P23416 452 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 NDST2P52849 883 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 HSPA2P54652 639 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 CD300CQ08708 224 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 PDIA2Q13087 525 aaKnown RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 SNX1Q13596 522 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 RCN2Q14257 317 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 ZNF146Q15072 292 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 PDK2Q15119 407 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 PKN2Q16513 984 aaKnown RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 METTL21CQ5VZV1 264 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 ZFP1Q6P2D0 407 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 DCUN1D2Q6PH85 259 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 C3orf62Q6ZUJ4 267 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 PLPPR4Q7Z2D5 763 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 SETD3Q86TU7 594 aaPredicted RBP3.29□□□□□ -1.88
TRIM4-205ENST00000496896 SLC25A42Q86VD7 318 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 LRRC6Q86X45 466 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 RNF130Q86XS8 419 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 HPS6Q86YV9 775 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 CBWD2Q8IUF1 395 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 CRLF3Q8IUI8 442 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 LRRC43Q8N309 656 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 LRTM2Q8N967 370 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 SLC4A11Q8NBS3 891 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 ZPLD1Q8TCW7 415 aa3.29□□□□□ -1.88
TRIM4-205ENST00000496896 TCP10LQ8TDR4 215 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms