RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 DUSP21Q9H596 190 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 MAN2C1Q9NTJ4 1040 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 RSL24D1Q9UHA3 163 aaKnown RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 RNF6Q9Y252 685 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CHST2Q9Y4C5 530 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CLDN16Q9Y5I7 305 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SNX5Q9Y5X3 404 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SDK1Q7Z5N4 2213 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ARID1BQ8NFD5 2236 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ZAR1LA6NP61 321 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PTGES3LE9PB15 166 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 TGFBR3LH3BV60 316 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 TOX3O15405 576 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 YKT6O15498 198 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 KIAA0513O60268 411 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 WBP4O75554 376 aaKnown RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CCNYL3P0C7X3 344 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PAX7P23759 505 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 FMO3P31513 532 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 TAS2R41P59536 307 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 BTG2P78543 158 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CSTF1Q05048 431 aaKnown RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF155Q12901 538 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 FOXD4Q12950 439 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ILKQ13418 452 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 TUBA3CQ13748 450 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ERV3-1Q14264 604 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 TRAM2Q15035 370 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PTGES3Q15185 160 aaKnown RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 GPR68Q15743 365 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SYT16Q17RD7 645 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 YOD1Q5VVQ6 348 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CD300LDQ6UXZ3 194 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 GPR135Q8IZ08 494 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 OR4C6Q8NH72 309 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 RHOXF1Q8NHV9 184 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 FAM81AQ8TBF8 368 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SAP25Q8TEE9 199 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 IPCEF1Q8WWN9 437 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PIK3R3Q92569 461 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CCDC74AQ96AQ1 378 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 EVA1AQ9H8M9 152 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CCNB1IP1Q9NPC3 277 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 RASSF1Q9NS23 344 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 REV1Q9UBZ9 1251 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 FTSJ1Q9UET6 329 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SERTAD3Q9UJW9 196 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CDC14AQ9UNH5 594 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 GPR55Q9Y2T6 319 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 TMEM184BQ9Y519 407 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PCDHGB1Q9Y5G3 927 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CABIN1Q9Y6J0 2220 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 TTC36A6NLP5 189 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 AP3D1O14617 1153 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 XPNPEP2O43895 674 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 BRINP1O60477 761 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 MPZL2O60487 215 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 CDC123O75794 336 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 CYP7B1O75881 506 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 HTR1AP08908 422 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 CHMP24386 653 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 EMDP50402 254 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 SH3BGRP55822 239 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 RGS8P57771 180 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 CDC42P60953 191 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 EEF1A1P68104 462 aaKnown RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 SLC35A2P78381 396 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 ST3GAL3Q11203 375 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 TARDBPQ13148 414 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 RAB39AQ14964 217 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 NR0B2Q15466 257 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 NEDD8Q15843 81 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 SNAP47Q5SQN1 464 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 CCNJQ5T5M9 372 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 PEAR1Q5VY43 1037 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 XAF1Q6GPH4 301 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 B3GNT6Q6ZMB0 384 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF836Q6ZNA1 936 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 Q6ZPB1 254 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 TTLL10Q6ZVT0 673 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 P3H2Q8IVL5 708 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 C1orf210Q8IVY1 113 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 MAML2Q8IZL2 1156 aaPredicted RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 MORN4Q8NDC4 146 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 TOR1AIP2Q8NFQ8 470 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 OR4K5Q8NGD3 323 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 APH1BQ8WW43 257 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 DIO2Q92813 273 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 SLC38A4Q969I6 547 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 UBE2FQ969M7 185 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 OR1F2PQ96R84 312 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 POLR2J2Q9GZM3 115 aaKnown RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 POLR2J3Q9H1A7 115 aaKnown RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF768Q9H5H4 540 aaKnown RBP13.06□□□□□ -0.32
PTPN7-216ENST00000492977 ARMC7Q9H6L4 198 aa13.06□□□□□ -0.32
PTPN7-216ENST00000492977 FANCEQ9HB96 536 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms