RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 SLC17A2O00624 439 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 TYROBPO43914 113 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 SMPD2O60906 423 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 PEX11AO75192 247 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 SYNGR4O95473 234 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 PTBP3O95758 552 aaKnown RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 IFNB1P01574 187 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 HIST1H2AGP0C0S8 130 aaPredicted RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 HSPA1LP34931 641 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 ACAA2P42765 397 aaKnown RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 ACADSBP45954 432 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 ALDH3B2P48448 385 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 MTTPP55157 894 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 HSD17B7P56937 341 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 NME3Q13232 169 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 SNX1Q13596 522 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 GPAT3Q53EU6 434 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 IL23RQ5VWK5 629 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 ZNF530Q6P9A1 599 aaPredicted RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 ZCCHC12Q6PEW1 402 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 ATRAIDQ6UW56 229 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 IGFL2Q6UWQ7 119 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 LRRC17Q8N6Y2 441 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 FNDC8Q8TC99 324 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 HIST1H2ACQ93077 130 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 TECTBQ96PL2 329 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 CBWD1Q9BRT8 395 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 SIRPDQ9H106 197 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 TSPY26PQ9H489 355 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 ISG20L2Q9H9L3 353 aaKnown RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 HPS4Q9NQG7 708 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 CNOT2Q9NZN8 540 aaKnown RBP2.45□□□□□ -2.02
RFC4-213ENST00000489028 ERVK-18Q9QC07 812 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 SLC2A6Q9UGQ3 507 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 NTNG1Q9Y2I2 539 aa2.45□□□□□ -2.02
RFC4-213ENST00000489028 A0A0U1RRA0 63 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 FAM231BA6NCW3 169 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 F8WDY8 70 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 LRP3O75074 770 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 SCGB2A1O75556 95 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 PROS1P07225 676 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 CPN1P15169 458 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 GNSP15586 552 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 AKT2P31751 481 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 PRPHP41219 470 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 MAGEA4P43358 317 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 XCR1P46094 333 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 HLCSP50747 726 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 CCL11P51671 97 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 MYBPC1Q00872 1141 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 GABPB1Q06547 395 aaPredicted RBP2.44□□□□□ -2.02
RFC4-213ENST00000489028 CD47Q08722 323 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 SPP2Q13103 211 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 PDZK1IP1Q13113 114 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 SERTAD2Q14140 314 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 PDIA5Q14554 519 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 CEBPEQ15744 281 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 ZKSCAN8Q15776 578 aaPredicted RBP2.44□□□□□ -2.02
RFC4-213ENST00000489028 ZIC1Q15915 447 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 CMPK2Q5EBM0 449 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 RIPPLY2Q5TAB7 128 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 GALNT17Q6IS24 598 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 FAM159AQ6UWV7 190 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 LCA5Q86VQ0 697 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 OR4F17Q8NGA8 305 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 CCDC26Q8TAB7 109 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 RFESDQ8TAC1 157 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 FCGR1BQ92637 280 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 TRIM44Q96DX7 344 aaPredicted RBP2.44□□□□□ -2.02
RFC4-213ENST00000489028 FAM122AQ96E09 287 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 VPS39Q96JC1 886 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 MAGEB18Q96M61 343 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 OR4F4Q96R69 305 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 KIR2DL4Q99706 377 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 THUMPD2Q9BTF0 503 aaKnown RBP2.44□□□□□ -2.02
RFC4-213ENST00000489028 RIBC2Q9H4K1 309 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 ASB8Q9H765 288 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 ECT2Q9H8V3 914 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 VAT1LQ9HCJ6 419 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 SLC35D1Q9NTN3 355 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 ADAM22Q9P0K1 906 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 BCAP29Q9UHQ4 241 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 ENTPD4Q9Y227 616 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 SLC9A8Q9Y2E8 581 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 NPC1L1Q9UHC9 1359 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 SYNJ2O15056 1496 aa2.44□□□□□ -2.02
RFC4-213ENST00000489028 NCAPD2Q15021 1401 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 IGLV8-61A0A075B6I0 122 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 A0A087WZY1 265 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 FAM230AA0A1W2PPH8 454 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 MFSD2BA6NFX1 497 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 B4DXG7 233 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 ANGPT2O15123 496 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 IDH1O75874 414 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 DIRAS3O95661 229 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 AK1P00568 194 aa2.43□□□□□ -2.02
RFC4-213ENST00000489028 HSPB1P04792 205 aaKnown RBP2.43□□□□□ -2.02
RFC4-213ENST00000489028 NCF1P14598 390 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms