RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 TRIM44Q96DX7 344 aaPredicted RBP10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ELP4Q96EB1 424 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 METTL2AQ96IZ6 378 aaKnown RBP10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 UCN2Q96RP3 112 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 LMF2Q9BU23 707 aaKnown RBP10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 MECRQ9BV79 373 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CALHM2Q9HA72 323 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SLC24A3Q9HC58 644 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 RRAGDQ9NQL2 400 aaPredicted RBP10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 DDX18Q9NVP1 670 aaKnown RBP10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 C1orf109Q9NX04 203 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 LGALS13Q9UHV8 139 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 DKKL1Q9UK85 242 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ITGB1BP2Q9UKP3 347 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CBLCQ9ULV8 474 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ABCG2Q9UNQ0 655 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 WBP11Q9Y2W2 641 aaKnown RBP10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 OR10H1Q9Y4A9 318 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 DNAJC15Q9Y5T4 150 aa10.17□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CLCA1A8K7I4 914 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SYT5O00445 386 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 AZIN1O14977 448 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 PDPK1O15530 556 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 HCRTR2O43614 444 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ZIC3O60481 467 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ZWINTO95229 277 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 IGKV1D-16P01601 117 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 NEFHP12036 1026 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TCEA1P23193 301 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 DNAJA1P31689 397 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 KRT20P35900 424 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 MAP3K8P41279 467 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 STARP49675 285 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 AGFG1P52594 562 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 HSPB3Q12988 150 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 RCAN2Q14206 197 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 RFTN2Q52LD8 501 aaPredicted RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 XKR7Q5GH72 579 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SH2D4BQ5SQS7 431 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CES4AQ5XG92 561 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ZNF551Q7Z340 670 aaPredicted RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TRIM42Q8IWZ5 723 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GCNT2Q8N0V5 402 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 OR2M3Q8NG83 312 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CLHC1Q8NHS4 586 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GFM2Q969S9 779 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SFXN2Q96NB2 322 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TSSK3Q96PN8 268 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GPATCH1Q9BRR8 931 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TRMOQ9BU70 441 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 LRTM1Q9HBL6 345 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 FAM120CQ9NX05 1096 aaKnown RBP10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 PPP4R1LQ9P1A2 415 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SLC17A7Q9P2U7 560 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 MID2Q9UJV3 735 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 FIS1Q9Y3D6 152 aa10.16□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GXYLT2A0PJZ3 443 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 EEF1E1-BLOC1S5C9J1V9 151 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SLC28A1O00337 649 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 EEF1E1O43324 174 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TBX19O60806 448 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TRIM13O60858 407 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SEC22BO75396 215 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 IL33O95760 270 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 IL18BPO95998 194 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TMIGD3P0DMS9 266 aaPredicted RBP10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CHMP24386 653 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CTSSP25774 331 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 DPP4P27487 766 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ALDH3A1P30838 453 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 KIR2DL3P43628 341 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CLDN15P56746 228 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SORDQ00796 357 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 STX5Q13190 355 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GAB1Q13480 694 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SF3B4Q15427 424 aaKnown RBP eCLIP10.15□□□□□ -0.784e-10■■■■■ 32.8
RAB11FIP3-210ENST00000487899 UGT3A2Q3SY77 523 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 CYP27C1Q4G0S4 372 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ENPP6Q6UWR7 440 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 APOOLQ6UXV4 268 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ZCCHC23Q6ZST2 131 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 RIBC1Q8N443 379 aaPredicted RBP10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 AENQ8WTP8 325 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 TWIST2Q8WVJ9 160 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GIMAP5Q96F15 307 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 ZFP3Q96NJ6 502 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 FAM111AQ96PZ2 611 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 SFXN3Q9BWM7 321 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 LIME1Q9H400 295 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 Q9N2J8 555 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 EQTNQ9NQ60 294 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 NTMQ9P121 344 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 GIMAP2Q9UG22 337 aa10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 RPH3AQ9Y2J0 694 aaPredicted RBP10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 MRPS18CQ9Y3D5 142 aaKnown RBP10.15□□□□□ -0.78
RAB11FIP3-210ENST00000487899 IGLV3-32A0A0A0MS00 114 aa10.14□□□□□ -0.79
RAB11FIP3-210ENST00000487899 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.14□□□□□ -0.79
RAB11FIP3-210ENST00000487899 A6NNC1 897 aa10.14□□□□□ -0.79
RAB11FIP3-210ENST00000487899 PIP5K1BO14986 540 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms