RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 GRIN2DO15399 1336 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TDRD15B5MCY1 1934 aaKnown RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 COL5A2P05997 1499 aaPredicted RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 A0A1B0GUL7 405 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 LRRC30A6NM36 301 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 WASHC1A8K0Z3 465 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TM9SF1O15321 606 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 NOL3O60936 208 aaKnown RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 PRAMEF12O95522 483 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 GUCA1CO95843 209 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 PIGRP01833 764 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 CALCBP10092 127 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 BCL3P20749 454 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 GATA2P23769 480 aaPredicted RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 HMGCLP35914 325 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 PTGER3P43115 390 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 POU3F4P49335 361 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 EMDP50402 254 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 HMGCS2P54868 508 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TFDP1Q14186 410 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 RAB35Q15286 201 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TRIP10Q15642 601 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 LTB4RQ15722 352 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 PPP1R3AQ16821 1122 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 MICAQ29983 383 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 DCAF4L1Q3SXM0 396 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TMEM41BQ5BJD5 291 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 DNAJC21Q5F1R6 531 aaKnown RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF311Q5JNZ3 666 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 RIPPLY2Q5TAB7 128 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 NIPAL3Q6P499 406 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 SLC39A4Q6P5W5 647 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 BTNL3Q6UXE8 466 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 CCBE1Q6UXH8 406 aaPredicted RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF600Q6ZNG1 722 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 ERASQ7Z444 233 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 LHFPL4Q7Z7J7 247 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF573Q86YE8 665 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 CBWD2Q8IUF1 395 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF671Q8TAW3 534 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TADA1Q96BN2 335 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 HPDLQ96IR7 371 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 ELMO2Q96JJ3 720 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 PKNOX2Q96KN3 472 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 C1orf147Q96MC9 270 aaPredicted RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 C9orf85Q96MD7 179 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 MCCC1Q96RQ3 725 aaPredicted RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 THUMPD2Q9BTF0 503 aaKnown RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TBCDQ9BTW9 1192 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF416Q9BWM5 594 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TBC1D10AQ9BXI6 508 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 MRPL13Q9BYD1 178 aaKnown RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 COG4Q9H9E3 785 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TIGARQ9NQ88 270 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 FAM120CQ9NX05 1096 aaKnown RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 IMPAD1Q9NX62 359 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 DHRS4-AS1Q9P1J3 65 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 BARX2Q9UMQ3 279 aaPredicted RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 EIF3LQ9Y262 564 aaKnown RBP2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 NTNG1Q9Y2I2 539 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 MFHAS1Q9Y4C4 1052 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 AP1M2Q9Y6Q5 423 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 CROCCQ5TZA2 2017 aa2.74□□□□□ -1.97
SNRNP27-204ENST00000487029 TRAV9-2A0A087WT02 112 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 GPRIN2O60269 458 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 LCMT2O60294 686 aaKnown RBP2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 RAMP1O60894 148 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF253O75346 499 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 OR4F21O95013 312 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 CYLC1P35663 651 aaPredicted RBP2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 ARHGDIBP52566 201 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 OSTNP61366 133 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 RPS6P62753 249 aaKnown RBP2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 UBE2V2Q15819 145 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 EIPR1Q53HC9 387 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 SLX4IPQ5VYV7 408 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 TMEM184AQ6ZMB5 413 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 CENPUQ71F23 418 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 PARGQ86W56 976 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 CENPLQ8N0S6 344 aaPredicted RBP2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 STKLD1Q8NE28 680 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 OR5AU1Q8NGC0 362 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 AGAP11Q8TF27 550 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 SYAP1Q96A49 352 aaPredicted RBP2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 UPRTQ96BW1 309 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 FOXN4Q96NZ1 517 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 TESK2Q96S53 571 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 APOL2Q9BQE5 337 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 WDR76Q9H967 626 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 GPN2Q9H9Y4 310 aaPredicted RBP2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 CUTCQ9NTM9 273 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 SLC35D1Q9NTN3 355 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 AGPAT5Q9NUQ2 364 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 GALPQ9UBC7 116 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 PRODH2Q9UF12 536 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 SH3BGRL2Q9UJC5 107 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 B9D1Q9UPM9 204 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 RNF6Q9Y252 685 aa2.73□□□□□ -1.97
SNRNP27-204ENST00000487029 AP4B1Q9Y6B7 739 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms