RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 CHRM4P08173 479 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 NR2F1P10589 423 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 CD96P40200 585 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 ANXA11P50995 505 aaKnown RBP13□□□□□ -0.33
SRSF6-202ENST00000483871 POLE2P56282 527 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 NCALDP61601 193 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 COL28A1Q2UY09 1125 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 ZNF791Q3KP31 576 aaPredicted RBP13□□□□□ -0.33
SRSF6-202ENST00000483871 LINC00303Q3SY05 128 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 RPS26P11Q5JNZ5 115 aaPredicted RBP13□□□□□ -0.33
SRSF6-202ENST00000483871 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 ARPINQ7Z6K5 226 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 HMGN2P46Q86SG4 172 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 ZZZ3Q8IYH5 903 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 CHDHQ8NE62 594 aaPredicted RBP13□□□□□ -0.33
SRSF6-202ENST00000483871 NFKBIDQ8NI38 313 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 ASB15Q8WXK1 588 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 DIO2Q92813 273 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 ABHD17AQ96GS6 310 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 TMEM19Q96HH6 336 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 CLPTM1LQ96KA5 538 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 THTPAQ9BU02 230 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 ALG2Q9H553 416 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 NDE1Q9NXR1 346 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 FLRT3Q9NZU0 649 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 P2RX2Q9UBL9 471 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 CSAG2Q9Y5P2 127 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 SPENQ96T58 3664 aaKnown RBP13□□□□□ -0.33
SRSF6-202ENST00000483871 BOD1L1Q8NFC6 3051 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 CACNA1GO43497 2377 aa13□□□□□ -0.33
SRSF6-202ENST00000483871 SLC28A2O43868 658 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 PPM1BO75688 479 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 IL33O95760 270 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 AGR2O95994 175 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 ARAFP10398 606 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 GSK3BP49841 420 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CDK6Q00534 326 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 OC90Q02509 493 aaPredicted RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CHRNEQ04844 493 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CEACAM7Q14002 265 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 GPR68Q15743 365 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 ST3GAL2Q16842 350 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SPINK14Q6IE38 97 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 OPN5Q6U736 354 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 MDGA2Q7Z553 956 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 NET1Q7Z628 596 aaPredicted RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 ZNF227Q86WZ6 799 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SLC15A4Q8N697 577 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CATSPER1Q8NEC5 780 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 OR10G3Q8NGC4 313 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SIGLEC12Q96PQ1 595 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SMAD5Q99717 465 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 QRSL1Q9H0R6 528 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SLC38A1Q9H2H9 487 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 HPF1Q9NWY4 346 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CD300AQ9UGN4 299 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SOX30O94993 753 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 ITGB2P05107 769 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 FBXO45P0C2W1 286 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CYP4B1P13584 511 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 IL12BP29460 328 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 AQP1P29972 269 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 KRT20P35900 424 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 MAGEA8P43361 318 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CD97P48960 835 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 RNF144AP50876 292 aaPredicted RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 PNLIPRP2P54317 469 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 EEFSECP57772 596 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 MFAP5Q13361 173 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 TUBA3CQ13748 450 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SCARB2Q14108 478 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 NTRK2Q16620 822 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 ZSCAN26Q16670 478 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 VMACQ2NL98 169 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 TYW3Q6IPR3 259 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 TUBA3EQ6PEY2 450 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 BNC2Q6ZN30 1099 aaPredicted RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 FRRS1Q6ZNA5 592 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 FAM13CQ8NE31 585 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 OR2T12Q8NG77 320 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 OR4C3Q8NH37 302 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SPACA9Q96E40 222 aaPredicted RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 TRNT1Q96Q11 434 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 NODALQ96S42 347 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 CADM1Q9BY67 442 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 ZNF350Q9GZX5 532 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 A4GALTQ9NPC4 353 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 THUMPD1Q9NXG2 353 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 LRFN1Q9P244 771 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 LIPT1Q9Y234 373 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 WDR45Q9Y484 360 aa12.99□□□□□ -0.33
SRSF6-202ENST00000483871 PCDHGA9Q9Y5G4 932 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.99□□□□□ -0.33
SRSF6-202ENST00000483871 NINQ8N4C6 2090 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 CENPVL1A0A0U1RR11 272 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 ELOVL7A1L3X0 281 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 GSC2O15499 205 aa12.98□□□□□ -0.33
SRSF6-202ENST00000483871 RRP9O43818 475 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms