RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SAP130Q9H0E3 1048 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 MTHFD2LQ9H903 347 aaPredicted RBP16.26■□□□□ 0.19
UPF3A-206ENST00000480362 LIN28AQ9H9Z2 209 aaKnown RBP16.26■□□□□ 0.19
UPF3A-206ENST00000480362 ZNF160Q9HCG1 818 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 CCM2LQ9NUG4 571 aaPredicted RBP16.26■□□□□ 0.19
UPF3A-206ENST00000480362 MKLN1Q9UL63 735 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 AURKCQ9UQB9 309 aa16.26■□□□□ 0.19
UPF3A-206ENST00000480362 DSPPQ9NZW4 1301 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 CDC14CA4D256 554 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 TMEM229AB2RXF0 380 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 SUV39H1O43463 412 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 ZFAND5O76080 213 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 CELA2AP08217 269 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 LIFP15018 202 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
UPF3A-206ENST00000480362 GPR68Q15743 365 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 DECR1Q16698 335 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 TBC1D25Q3MII6 688 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 PLAG1Q6DJT9 500 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 HMGN2P46Q86SG4 172 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 ARMC8Q8IUR7 673 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 SMYD1Q8NB12 490 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 C17orf47Q8NEP4 570 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 NUBPLQ8TB37 319 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 THAP3Q8WTV1 239 aaPredicted RBP16.25■□□□□ 0.19
UPF3A-206ENST00000480362 POP5Q969H6 163 aaKnown RBP16.25■□□□□ 0.19
UPF3A-206ENST00000480362 TP53INP1Q96A56 240 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 ZG16BQ96DA0 208 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 HSPBAP1Q96EW2 488 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 HSH2DQ96JZ2 352 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 LMF1Q96S06 567 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 G6PC3Q9BUM1 346 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 SPATA5L1Q9BVQ7 753 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 DEFB126Q9BYW3 111 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 QRSL1Q9H0R6 528 aaKnown RBP16.25■□□□□ 0.19
UPF3A-206ENST00000480362 DCLRE1BQ9H816 532 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 MMP25Q9NPA2 562 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 POLE3Q9NRF9 147 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 P4HTMQ9NXG6 502 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 FBXL4Q9UKA2 621 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 WASF3Q9UPY6 502 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 AP4S1Q9Y587 144 aa16.25■□□□□ 0.19
UPF3A-206ENST00000480362 H3BNX3 289 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 MASP2O00187 686 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 PEX12O00623 359 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 TO15178 435 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 ATP6V1G2O95670 118 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 HPP00738 406 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 ALPPP05187 535 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 GUSBP08236 651 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 ATP6V1C1P21283 382 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 AP2B1P63010 937 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 CHRNB3Q05901 458 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 RCN1Q15293 331 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 FAM98BQ52LJ0 330 aaKnown RBP16.24■□□□□ 0.19
UPF3A-206ENST00000480362 AP1ARQ63HQ0 302 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 FKBP9P1Q75LS8 142 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 VTCN1Q7Z7D3 282 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 ZAR1Q86SH2 424 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 MRGPREQ86SM8 312 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 VASH2Q86V25 355 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 PRR22Q8IZ63 422 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 ZNF619Q8N2I2 560 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 SPPL2AQ8TCT8 520 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 ADAMTS17Q8TE56 1095 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 LZICQ8WZA0 190 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 SLC47A1Q96FL8 570 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 DOHHQ9BU89 302 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 EFHD1Q9BUP0 239 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 RSPO3Q9BXY4 272 aaPredicted RBP16.24■□□□□ 0.19
UPF3A-206ENST00000480362 SEC14L3Q9UDX4 400 aa16.24■□□□□ 0.19
UPF3A-206ENST00000480362 PIEZO1Q92508 2521 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 NPIPA5A0A0B4J1W7 369 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 TMEM200CA6NKL6 621 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 NPIPA7E9PJI5 369 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 WWP2O00308 870 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 ACOX3O15254 700 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 PABPC4LP0CB38 370 aaKnown RBP16.23■□□□□ 0.19
UPF3A-206ENST00000480362 NPIPA8P0DM63 369 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 ICAM2P13598 275 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 CD247P20963 164 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 ATP1A4Q13733 1029 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 DUSP7Q16829 419 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 FLYWCH1Q4VC44 716 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 TBCELQ5QJ74 424 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 FBXW10Q5XX13 1052 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 C16orf47Q6ZP98 133 aaPredicted RBP16.23■□□□□ 0.19
UPF3A-206ENST00000480362 PAPD5Q8NDF8 572 aaKnown RBP16.23■□□□□ 0.19
UPF3A-206ENST00000480362 OR52P1PQ8NH57 321 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 RASSF5Q8WWW0 418 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 PMM1Q92871 262 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 TMBIM1Q969X1 311 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 EFHD2Q96C19 240 aaPredicted RBP16.23■□□□□ 0.19
UPF3A-206ENST00000480362 MAGIXQ9H6Y5 334 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 ARMC1Q9NVT9 282 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 MRTO4Q9UKD2 239 aaKnown RBP16.23■□□□□ 0.19
UPF3A-206ENST00000480362 ANGPTL2Q9UKU9 493 aa16.23■□□□□ 0.19
UPF3A-206ENST00000480362 DMXL1Q9Y485 3027 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 KIAA0513O60268 411 aa16.22■□□□□ 0.19
UPF3A-206ENST00000480362 TPST1O60507 370 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms