RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	OR56A4	Q8NGH8	313 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MOSPD2	Q8NHP6	518 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CEP76	Q8TAP6	659 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM110B	Q8TC76	370 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	METTL6	Q8TCB7	284 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	C15orf40	Q8WUR7	153 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	APH1B	Q8WW43	257 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC5A11	Q8WWX8	675 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	OSTF1	Q92882	214 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	LPP	Q93052	612 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	RAB24	Q969Q5	203 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPP1R14A	Q96A00	147 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	NTAN1	Q96AB6	310 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ELP4	Q96EB1	424 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM120B	Q96EK7	910 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MRPS24	Q96EL2	167 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	P2RY11	Q96G91	374 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	C7orf34	Q96L11	122 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CMTM3	Q96MX0	182 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	DEFB118	Q96PH6	123 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ELF4	Q99607	663 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	GINS4	Q9BRT9	223 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	C2orf88	Q9BSF0	95 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	THUMPD3	Q9BV44	507 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CNPPD1	Q9BV87	410 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SNRNP25	Q9BV90	132 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	NLN	Q9BYT8	704 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CPEB1	Q9BZB8	566 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	BARHL1	Q9BZE3	327 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	EGLN1	Q9GZT9	426 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	WNT5B	Q9H1J7	359 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ABCG8	Q9H221	673 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC38A1	Q9H2H9	487 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CDIP1	Q9H305	208 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	XKR8	Q9H6D3	395 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	TUBA4B	Q9H853	241 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	APOBEC3G	Q9HC16	384 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	GLOD4	Q9HC38	313 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPN1	Q9HCN4	374 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MID1IP1	Q9NPA3	183 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	EXOSC4	Q9NPD3	245 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF302	Q9NR11	478 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	NRBP2	Q9NSY0	501 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	PDP1	Q9P0J1	537 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	KCMF1	Q9P0J7	381 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR12D3	Q9UGF7	316 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBQLN1	Q9UMX0	589 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CORO2B	Q9UQ03	480 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	RPL36	Q9Y3U8	105 aa	Known RBP	4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC22A7	Q9Y694	548 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520	MICAL3	Q7RTP6	2002 aa		4.43	□□□□□ -1.7
PTCD3-212	ENST00000477520		A0A096LPI6	279 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	IGKV6D-21	A0A0A0MT36	114 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520		A0A0D9SG52	128 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TRDV1	A0A1B0GX56	115 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLSCR5	A0PG75	271 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	MYO1G	B0I1T2	1018 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	DISC1	C4P0D8	188 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	MCRIP1	C9JLW8	97 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	BLOC1S5-TXNDC5	H3BN57	136 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ADAM10	O14672	748 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CACNG3	O60359	315 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	HBP1	O60381	514 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRAMEF2	O60811	474 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	RBBP9	O75884	186 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR2A4	O95047	310 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	APBB3	O95704	486 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PGK1	P00558	417 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	HP	P00738	406 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	POMC	P01189	267 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PTH	P01270	115 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SEMG1	P04279	462 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	TCRB	P04435	133 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CYP17A1	P05093	508 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	IL5	P05113	134 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	RPLP2	P05387	115 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	STS	P08842	583 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	HOXC4	P09017	264 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	GABRA1	P14867	456 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	ENG	P17813	658 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	GABRB1	P18505	474 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	RHCE	P18577	417 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	OGN	P20774	298 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	AHCY	P23526	432 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PTAFR	P25105	342 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	LAP3	P28838	519 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	RBMS1	P29558	406 aa	Known RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	PDHA2	P29803	388 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	C21orf33	P30042	268 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	AGTR1	P30556	359 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	HOXA9	P31269	272 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	GPX4	P36969	197 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	CEACAM6	P40199	344 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	POU3F4	P49335	361 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	STK19	P49842	368 aa	Predicted RBP	4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	EFNA5	P52803	228 aa		4.42	□□□□□ -1.7
PTCD3-212	ENST00000477520	SUCLG1	P53597	346 aa	Known RBP	4.42	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms