RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 UPRTQ96BW1 309 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 BIRC7Q96CA5 298 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 C4orf36Q96KX1 117 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF607Q96SK3 696 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 PAIP2Q9BPZ3 127 aaKnown RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 LRRC40Q9H9A6 602 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 IL1RAPQ9NPH3 570 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 FAM114A2Q9NRY5 505 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF446Q9NWS9 450 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 TAS2R16Q9NYV7 291 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 CACNG5Q9UF02 275 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF580Q9UK33 172 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 RRP15Q9Y3B9 282 aaKnown RBP3.55□□□□□ -1.84
BRCA1-212ENST00000473961 KIF21AQ7Z4S6 1674 aa3.55□□□□□ -1.84
BRCA1-212ENST00000473961 DENND4BO75064 1496 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SCAF11Q99590 1463 aaKnown RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 PLEKHG2Q9H7P9 1386 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 TRGV8A0A0C4DH27 118 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ASB14A6NK59 587 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 PCP4L1A6NKN8 68 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 LRRC30A6NM36 301 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 C11orf98E9PRG8 122 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 PPIAL4DF5H284 164 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 G3V2L1 256 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 H0YHG0 523 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 H0YL77 283 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 H3BMH7 237 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 K7ERI5 159 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 PDLIM1O00151 329 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ARHGEF9O43307 516 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF749O43361 778 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 PRAMEF12O95522 483 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 CHRNA1P02708 482 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 TPM1P09493 284 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 CLUP10909 449 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SAA4P35542 130 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 RAG2P55895 527 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SARNPP82979 210 aaKnown RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 CSTF1Q05048 431 aaKnown RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF146Q15072 292 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ZSCAN26Q16670 478 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 CNPY1Q3B7I2 92 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 FILIP1LQ4L180 1135 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 REP15Q6BDI9 236 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ASPHD2Q6ICH7 369 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 CENPPQ6IPU0 288 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 TMEM184AQ6ZMB5 413 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 TMUB2Q71RG4 321 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 LHFPL4Q7Z7J7 247 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 CARM1Q86X55 608 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 OR2T34Q8NGX1 318 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 NPRL2Q8WTW4 380 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SPRYD4Q8WW59 207 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 MYLPFQ96A32 169 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SDSLQ96GA7 329 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SLC45A3Q96JT2 553 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 PSMB7Q99436 277 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 LITAFQ99732 161 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 OPRPNQ99935 248 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 FAM173AQ9BQD7 235 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 MCRIP2Q9BUT9 160 aaKnown RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 TBC1D10AQ9BXI6 508 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 FGFBP2Q9BYJ0 223 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 OCR1Q9BZK8 76 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 FAM107BQ9H098 131 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 DHX33Q9H6R0 707 aaKnown RBP3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ZNF696Q9H7X3 374 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 ABCC13Q9NSE7 274 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SENP1Q9P0U3 644 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 GAB2Q9UQC2 676 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SMC3Q9UQE7 1217 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 WDR45Q9Y484 360 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 MAB21L2Q9Y586 359 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SPACA6W5XKT8 324 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SMARCA4P51532 1647 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 SHROOM2Q13796 1616 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 BIVM-ERCC5R4GMW8 1640 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 GAPVD1Q14C86 1478 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 FYCO1Q9BQS8 1478 aa3.54□□□□□ -1.84
BRCA1-212ENST00000473961 PTPRKQ15262 1439 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 UHRF1BP1Q6BDS2 1440 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 ELP1O95163 1332 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 KIF14Q15058 1648 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 WDR81Q562E7 1941 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 TRBV5-4A0A0C4DH59 114 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 TRBV7-9A0A0J9YWB2 115 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 MFSD2BA6NFX1 497 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 ARHGEF33A8MVX0 844 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 SDHDO14521 159 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 CTAGE5O15320 804 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 RANBP6O60518 1105 aaKnown RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 BCAS1O75363 584 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 TOXO94900 526 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 GOT2P00505 430 aaKnown RBP3.53□□□□□ -1.84
BRCA1-212ENST00000473961 IGHG1P01857 330 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 BCKDHAP12694 445 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 UGT1A4P22310 534 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 OXTRP30559 389 aa3.53□□□□□ -1.84
BRCA1-212ENST00000473961 CYLC1P35663 651 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms