RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SYT7O43581 403 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RPS17P08708 135 aaKnown RBP12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FBXO43Q4G163 708 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LCN10Q6JVE6 187 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MEX3DQ86XN8 651 aaKnown RBP12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR51Q1Q8NH59 317 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MAL2Q969L2 176 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NSUN5Q96P11 429 aaKnown RBP12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PLEK2Q9NYT0 353 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 USP32Q8NFA0 1604 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LGALS8O00214 317 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CA3P07451 260 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TNFRSF1BP20333 461 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CAMLGP49069 296 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CSNK2A1P68400 391 aaPredicted RBP12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NTHL1P78549 312 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SF3B4Q15427 424 aaKnown RBP eCLIP12.58□□□□□ -0.43e-11■■■■■ 37.6
NPHP3-ACAD11-201ENST00000471702 CTC1Q2NKJ3 1217 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OSTM1Q86WC4 334 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FAM217AQ8IXS0 508 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CSNK2A3Q8NEV1 391 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RAB39BQ96DA2 213 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DZANK1Q9NVP4 752 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PMM2O15305 246 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 UGDHO60701 494 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 CD79BP40259 229 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SLC18B1Q6NT16 456 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TXNRD2Q9NNW7 524 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DECR2Q9NUI1 292 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LRIT1Q9P2V4 623 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PREX1Q8TCU6 1659 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 K7ERQ8 282 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RAB27BO00194 218 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RRP8O43159 456 aaKnown RBP12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PTGER1P34995 402 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MAP2K4P45985 399 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ESX1Q8N693 406 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NAT8LQ8N9F0 302 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RLN3Q8WXF3 142 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ARL6Q9H0F7 186 aa12.58□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MEOX1P50221 254 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RPS15AP62244 130 aaKnown RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SF3A2Q15428 464 aaKnown RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DOHHQ9BU89 302 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DCDC2BA2VCK2 349 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 STMND1H3BQB6 276 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PORP16435 677 aaPredicted RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FOXN2P32314 431 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NADK2Q4G0N4 442 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 XPNPEP1Q9NQW7 623 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TOR1AO14656 332 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 UNGP13051 313 aaPredicted RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GDF1P27539 372 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ADH6P28332 368 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RUNX3Q13761 415 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 AKR1C8PQ5T2L2 129 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 KBTBD6Q86V97 674 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SORCS2Q96PQ0 1159 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 DERL2Q9GZP9 239 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 FN3KRPQ9HA64 309 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 USP36Q9P275 1121 aaKnown RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LILRB3O75022 631 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TP53P04637 393 aaPredicted RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 HOXD8P13378 290 aaPredicted RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 G0S2P27469 103 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GSK3AP49840 483 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GGNBP1Q5YKI7 109 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LPCAT3Q6P1A2 487 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 XKR5Q6UX68 686 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 IL20RBQ6UXL0 311 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 LARP4Q71RC2 724 aaKnown RBP eCLIP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GPR155Q7Z3F1 870 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SMG8Q8ND04 991 aaKnown RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 OR2A12Q8NGT7 310 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SLC35F5Q8WV83 523 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TXNDC15Q96J42 360 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SERINC2Q96SA4 455 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SLC17A9Q9BYT1 436 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 NOCTQ9UK39 431 aaKnown RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MIA3Q5JRA6 1907 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 D6RAR5 112 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 HAPLN1P10915 354 aaPredicted RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 HOXA9P31269 272 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 GRB7Q14451 532 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 IQCKQ8N0W5 287 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNRF4Q8WWF5 429 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 SGTBQ96EQ0 304 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 IGSF21Q96ID5 467 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 MOV10Q9HCE1 1003 aaKnown RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 AGPAT2O15120 278 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 IFNA17P01571 189 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 C8BP07358 591 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 STC1P52823 247 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF630Q2M218 657 aaPredicted RBP12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF674Q2M3X9 581 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 PLBD1Q6P4A8 553 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 RDH10Q8IZV5 341 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 METTL4Q8N3J2 472 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 TSPEARQ8WU66 669 aa12.57□□□□□ -0.4
NPHP3-ACAD11-201ENST00000471702 ZNF845Q96IR2 970 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms