RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 C14orf177Q52M58 125 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 TMEM41BQ5BJD5 291 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 ZNF311Q5JNZ3 666 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 C9orf66Q5T8R8 295 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 GALNT17Q6IS24 598 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 ARMCX5Q6P1M9 558 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 ZNF562Q6V9R5 426 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 ZNF497Q6ZNH5 498 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 TSEN54Q7Z6J9 526 aaKnown RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 CBWD2Q8IUF1 395 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 LRRC49Q8IUZ0 686 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 ABHD12Q8N2K0 398 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 NFAM1Q8NET5 270 aaPredicted RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 RBM18Q96H35 190 aaKnown RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 VSTM2LQ96N03 204 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 CCDC28BQ9BUN5 200 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 TSPY26PQ9H489 355 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 WDR76Q9H967 626 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 POLD4Q9HCU8 107 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 ABCC13Q9NSE7 274 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 CGNQ9P2M7 1197 aaKnown RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 LAMP5Q9UJQ1 280 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 NAP1L2Q9ULW6 460 aaPredicted RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 MRPL11Q9Y3B7 192 aaKnown RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 KDM5AP29375 1690 aaKnown RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 SHPRHQ149N8 1683 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 GCC2Q8IWJ2 1684 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 COL16A1Q07092 1604 aaPredicted RBP3.29□□□□□ -1.88
PRPF3-204ENST00000470824 ABCC3O15438 1527 aa3.29□□□□□ -1.88
PRPF3-204ENST00000470824 CAMSAP2Q08AD1 1489 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 CCDC141Q6ZP82 1450 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 PARD3Q8TEW0 1356 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 FBLL1A6NHQ2 334 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 RPL37AP8A6NKH3 93 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 WASHC1A8K0Z3 465 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 H0YL77 283 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ANGPT2O15123 496 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 MAPK13O15264 365 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 MT-ND1P03886 318 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 SNRPCP09234 159 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 HOXB7P09629 217 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 UQCRBP14927 111 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 HTR2AP28223 471 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 GSK3BP49841 420 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 PRELPP51888 382 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 TRA2BP62995 288 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 EIF2B1Q14232 305 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 TRIP10Q15642 601 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 CCL14Q16627 93 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 PCK2Q16822 640 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 TMEM44Q2T9K0 475 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 VWA2Q5GFL6 755 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 LINC00242Q5T6M2 205 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 PRR5LQ6MZQ0 368 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 NIPAL3Q6P499 406 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 CENPUQ71F23 418 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 Q7L0L9 218 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 LHFPL4Q7Z7J7 247 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 EFCAB13Q8IY85 973 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ZNF440Q8IYI8 595 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ARL14Q8N4G2 192 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 OR10T2Q8NGX3 314 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 THRSPQ92748 146 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ZNF689Q96CS4 500 aaPredicted RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 NTNG2Q96CW9 530 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 DTNBP1Q96EV8 351 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 HPDLQ96IR7 371 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ELMO2Q96JJ3 720 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 VPS35Q96QK1 796 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 PSMB7Q99436 277 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 VGLL1Q99990 258 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 TBCDQ9BTW9 1192 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 MRPL13Q9BYD1 178 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ADGRL4Q9HBW9 690 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ESM1Q9NQ30 184 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 CENPMQ9NSP4 180 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 DCAF13Q9NV06 445 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 C1orf123Q9NWV4 160 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 DUS2Q9NX74 493 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 MLXQ9UH92 298 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 NWD1Q149M9 1564 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 ERVK-7P63135 1459 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 LRRC9Q6ZRR7 1453 aa3.28□□□□□ -1.88
PRPF3-204ENST00000470824 SCAF11Q99590 1463 aaKnown RBP3.28□□□□□ -1.88
PRPF3-204ENST00000470824 CCNB3Q8WWL7 1395 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 LRP6O75581 1613 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 ARHGEF5Q12774 1597 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 IGHV3-16A0A0C4DH30 117 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 A0A1B0GTH9 108 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 MFSD2BA6NFX1 497 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 FOXI3A8MTJ6 420 aaPredicted RBP3.27□□□□□ -1.89
PRPF3-204ENST00000470824 C11orf98E9PRG8 122 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 MCF2LO15068 1137 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 TYROBPO43914 113 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 SDC3O75056 442 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 SEMA4FO95754 770 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 PCCBP05166 539 aa3.27□□□□□ -1.89
PRPF3-204ENST00000470824 SOX6P35712 828 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms