RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ITPRIPL2Q3MIP1 535 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 USP39Q53GS9 565 aaKnown RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 RGS7BPQ6MZT1 257 aaPredicted RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 B3GNT8Q7Z7M8 397 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 COMTD1Q86VU5 262 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 OR2T4Q8NH00 348 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 OR14A16Q8NHC5 309 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 UPRTQ96BW1 309 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 HIST1H2AHQ96KK5 128 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 MCCC1Q96RQ3 725 aaPredicted RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 HIST1H2AJQ99878 128 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 H2AFJQ9BTM1 129 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 FOXQ1Q9C009 403 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 GFOD1Q9NXC2 390 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SH3BP4Q9P0V3 963 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 ZDHHC2Q9UIJ5 367 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 CYP8B1Q9UNU6 501 aa9.39□□□□□ -0.91
NUP50-214ENST00000469163 SAMHD1Q9Y3Z3 626 aaKnown RBP9.39□□□□□ -0.91
NUP50-214ENST00000469163 SPAG17Q6Q759 2223 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 DRGXA6NNA5 263 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 H0Y8X5 98 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 GPR31O00270 319 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 PPM1DO15297 605 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 MMP2P08253 660 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 LINC00032P0C843 101 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 ZNF7P17097 686 aaPredicted RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 HNF1AP20823 631 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 NR0B1P51843 470 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 POLR2LP62875 67 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 NR6A1Q15406 480 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 PRSS36Q5K4E3 855 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 C1orf185Q5T7R7 199 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 ZNF57Q68EA5 555 aaPredicted RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 TMEM220Q6QAJ8 160 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 OR2A12Q8NGT7 310 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 OR5J2Q8NH18 312 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 MOSPD2Q8NHP6 518 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 FIBINQ8TAL6 211 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 DNAJB14Q8TBM8 379 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 WBP1Q96G27 269 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 PIGQQ9BRB3 760 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 ADAT1Q9BUB4 502 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 AMBNQ9NP70 447 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 CFAP54Q96N23 3096 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 TARM1B6A8C7 271 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 SAP18O00422 153 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 PHYHO14832 338 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 GATBO75879 557 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 DCNP07585 359 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 THEGLP0DJG4 465 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 BPIP17213 487 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 GRK5P34947 590 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 CCR6P51684 374 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 LIMK2P53671 638 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 MSANTD1Q6ZTZ1 278 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 REC114Q7Z4M0 266 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 HSD11B1LQ7Z5J1 315 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 MIER2Q8N344 545 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 SYNPOQ8N3V7 929 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 TMEM145Q8NBT3 493 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 THAP6Q8TBB0 222 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 TCTEX1D2Q8WW35 142 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 LRIG1Q96JA1 1093 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 C7orf50Q9BRJ6 194 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 NXF2Q9GZY0 626 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 RHOJQ9H4E5 214 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 IL26Q9NPH9 171 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 VWA8A3KMH1 1905 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 A0A087X0M5 115 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 A0A1B0GX30 115 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 OR2A25A4D2G3 310 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 RAD1O60671 282 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 GPX5O75715 221 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 NMBP08949 121 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 ZNF25P17030 456 aaPredicted RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 PRKCHP24723 683 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 STOMP27105 288 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 CRABP1P29762 137 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 ETV6P41212 452 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 GCGRP47871 477 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 IL2P60568 153 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 SLC35A2P78381 396 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 MXD1Q05195 221 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 CNTN1Q12860 1018 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 BCL2L15Q5TBC7 163 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 KIAA1211LQ6NV74 962 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 TSSK4Q6SA08 328 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 LIX1Q8N485 282 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 FBXO39Q8N4B4 442 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 TMEM159Q96B96 161 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 MRPL37Q9BZE1 423 aaKnown RBP9.38□□□□□ -0.91
NUP50-214ENST00000469163 BARHL1Q9BZE3 327 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 SNTG1Q9NSN8 517 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 SEC14L3Q9UDX4 400 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 PCDHB14Q9Y5E9 798 aa9.38□□□□□ -0.91
NUP50-214ENST00000469163 ARNTLO00327 626 aa9.37□□□□□ -0.91
NUP50-214ENST00000469163 PLA2G10O15496 165 aa9.37□□□□□ -0.91
NUP50-214ENST00000469163 CHP2O43745 196 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms