RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 FICDQ9BVA6 458 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 COQ10BQ9H8M1 238 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 TRPV5Q9NQA5 729 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 ABCC13Q9NSE7 274 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 ATP6V0A2Q9Y487 856 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 XIRP1Q702N8 1843 aaKnown RBP4.02□□□□□ -1.77
LSM5-209ENST00000468872 CACNA1FO60840 1977 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 PARD3Q8TEW0 1356 aa4.02□□□□□ -1.77
LSM5-209ENST00000468872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.02□□□□□ -1.77
LSM5-209ENST00000468872 TTC26A0AVF1 554 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 H3BTX0 84 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 E2F3O00716 465 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 CLDN3O15551 220 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 GALR3O60755 368 aaPredicted RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 NUDT14O95848 222 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 IGHV3-9P01782 118 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 WNT2P09544 360 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 ACAA2P42765 397 aaKnown RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 TRPC1P48995 793 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 POU3F4P49335 361 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 ZNF33BQ06732 778 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 KLHL30Q0D2K2 578 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 BNIP1Q12981 228 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 EXOSC2Q13868 293 aaKnown RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 NHLRC3Q5JS37 347 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 PRR5LQ6MZQ0 368 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 AFTPHQ6ULP2 937 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 HACD2Q6Y1H2 254 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 TMUB2Q71RG4 321 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 LPCAT2Q7L5N7 544 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 TSEN54Q7Z6J9 526 aaKnown RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 SLC25A42Q86VD7 318 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 BEST4Q8NFU0 473 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 GIPC3Q8TF64 312 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 ITLN1Q8WWA0 313 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 CRYGNQ8WXF5 182 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 ADIPOR1Q96A54 375 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 TRIM6Q9C030 488 aaPredicted RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 DCAF13Q9NV06 445 aaKnown RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 GHRLQ9UBU3 117 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 AP1M2Q9Y6Q5 423 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 TP53BP1Q12888 1972 aaPredicted RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 NRKQ7Z2Y5 1582 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 CEP170BQ9Y4F5 1589 aaPredicted RBP4.01□□□□□ -1.77
LSM5-209ENST00000468872 FER1L5A0AVI2 2057 aa4.01□□□□□ -1.77
LSM5-209ENST00000468872 ZNF142P52746 1687 aaPredicted RBP4□□□□□ -1.77
LSM5-209ENST00000468872 NEO1Q92859 1461 aa4□□□□□ -1.77
LSM5-209ENST00000468872 A0A1B0GUL7 405 aa4□□□□□ -1.77
LSM5-209ENST00000468872 MFSD2BA6NFX1 497 aa4□□□□□ -1.77
LSM5-209ENST00000468872 NPIPA2E9PIF3 369 aa4□□□□□ -1.77
LSM5-209ENST00000468872 VENTXO95231 258 aa4□□□□□ -1.77
LSM5-209ENST00000468872 CAPN2P17655 700 aa4□□□□□ -1.77
LSM5-209ENST00000468872 DPP4P27487 766 aa4□□□□□ -1.77
LSM5-209ENST00000468872 PTGFRP43088 359 aa4□□□□□ -1.77
LSM5-209ENST00000468872 CDKN3Q16667 212 aa4□□□□□ -1.77
LSM5-209ENST00000468872 BEND6Q5SZJ8 279 aaPredicted RBP4□□□□□ -1.77
LSM5-209ENST00000468872 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
LSM5-209ENST00000468872 SLC39A4Q6P5W5 647 aa4□□□□□ -1.77
LSM5-209ENST00000468872 LHFPL4Q7Z7J7 247 aa4□□□□□ -1.77
LSM5-209ENST00000468872 GCNT2Q8N0V5 402 aa4□□□□□ -1.77
LSM5-209ENST00000468872 LYG1Q8N1E2 194 aa4□□□□□ -1.77
LSM5-209ENST00000468872 RASL10AQ92737 203 aa4□□□□□ -1.77
LSM5-209ENST00000468872 VSTM2LQ96N03 204 aa4□□□□□ -1.77
LSM5-209ENST00000468872 TESK2Q96S53 571 aa4□□□□□ -1.77
LSM5-209ENST00000468872 THUMPD2Q9BTF0 503 aaKnown RBP4□□□□□ -1.77
LSM5-209ENST00000468872 CARD6Q9BX69 1037 aa4□□□□□ -1.77
LSM5-209ENST00000468872 MRPL13Q9BYD1 178 aaKnown RBP4□□□□□ -1.77
LSM5-209ENST00000468872 UBXN6Q9BZV1 441 aa4□□□□□ -1.77
LSM5-209ENST00000468872 RPAP3Q9H6T3 665 aaPredicted RBP4□□□□□ -1.77
LSM5-209ENST00000468872 SLC35D1Q9NTN3 355 aa4□□□□□ -1.77
LSM5-209ENST00000468872 DUS2Q9NX74 493 aaKnown RBP4□□□□□ -1.77
LSM5-209ENST00000468872 KLRF1Q9NZS2 232 aa4□□□□□ -1.77
LSM5-209ENST00000468872 ATP6V1HQ9UI12 483 aa4□□□□□ -1.77
LSM5-209ENST00000468872 SH3BGRL2Q9UJC5 107 aa4□□□□□ -1.77
LSM5-209ENST00000468872 RNF24Q9Y225 148 aa4□□□□□ -1.77
LSM5-209ENST00000468872 GOLGB1Q14789 3259 aaKnown RBP4□□□□□ -1.77
LSM5-209ENST00000468872 TNIKQ9UKE5 1360 aa4□□□□□ -1.77
LSM5-209ENST00000468872 EFCAB5A4FU69 1503 aa4□□□□□ -1.77
LSM5-209ENST00000468872 SHPRHQ149N8 1683 aa4□□□□□ -1.77
LSM5-209ENST00000468872 DENND4BO75064 1496 aaPredicted RBP3.99□□□□□ -1.77
LSM5-209ENST00000468872 PCNX3Q9H6A9 2034 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 ATRNO75882 1429 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 NPATQ14207 1427 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 SRRM5B3KS81 715 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 SDHDO14521 159 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 TYROBPO43914 113 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 OR4F21O95013 312 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 KRT6BP04259 564 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 SHC1P29353 583 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 KRT6CP48668 564 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 ARHGDIAP52565 204 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 COX10Q12887 443 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 TFDP1Q14186 410 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 EIF2B1Q14232 305 aaKnown RBP3.99□□□□□ -1.77
LSM5-209ENST00000468872 TRIP10Q15642 601 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 Q7L0L9 218 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 ZNF573Q86YE8 665 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 CBWD2Q8IUF1 395 aa3.99□□□□□ -1.77
LSM5-209ENST00000468872 EFCAB13Q8IY85 973 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms