RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 EXOSC3Q9NQT5 275 aaKnown RBP3.44□□□□□ -1.86
CDC42BPA-211ENST00000466538 FARSBQ9NSD9 589 aaKnown RBP3.44□□□□□ -1.86
CDC42BPA-211ENST00000466538 RDH8Q9NYR8 311 aa3.44□□□□□ -1.86
CDC42BPA-211ENST00000466538 B9D1Q9UPM9 204 aa3.44□□□□□ -1.86
CDC42BPA-211ENST00000466538 NTNG1Q9Y2I2 539 aa3.44□□□□□ -1.86
CDC42BPA-211ENST00000466538 CLDN5O00501 218 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 SDHDO14521 159 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 PPIHO43447 177 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 LCMT2O60294 686 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 GAS8-AS1O95177 125 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 HPP00738 406 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 CSF2P04141 144 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 ASNSP08243 561 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 WNT2P09544 360 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 FAM200BP0CF97 657 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 TSPY4P0CV99 314 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 TSPY10P0CW01 314 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 CYLC1P35663 651 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 RPS6P62753 249 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 OVGP1Q12889 678 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 CRMP1Q14194 572 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 UBE2V2Q15819 145 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 CAMK4Q16566 473 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 PPP1R3AQ16821 1122 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 TPD52L1Q16890 204 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 TATDN3Q17R31 274 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 SLC22A18ASQ8N1D0 253 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 GMCL1P1Q8NEA9 526 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 THRSPQ92748 146 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 UPRTQ96BW1 309 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 RAB3CQ96E17 227 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 PIWIL1Q96J94 861 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 NFKBIZQ9BYH8 718 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 PUS3Q9BZE2 481 aaKnown RBP3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 CLEC5AQ9NY25 188 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 CACNA1FO60840 1977 aa3.43□□□□□ -1.86
CDC42BPA-211ENST00000466538 LRRC30A6NM36 301 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 E9PAM4 449 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 CASKO14936 926 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 SRPX2O60687 465 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 TBX19O60806 448 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 TRIM3O75382 744 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 PIGRP01833 764 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 PCCBP05166 539 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 IGFBP1P08833 259 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 OTX2P32243 289 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 CDH5P33151 784 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 POU3F4P49335 361 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 ACADVLP49748 655 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 KRTAP1-1Q07627 177 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 ELP6Q0PNE2 266 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 LTB4RQ15722 352 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 LINC01620Q4KN68 170 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 LGSNQ5TDP6 509 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 NCR3LG1Q68D85 454 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 ASPHD2Q6ICH7 369 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 PNCKQ6P2M8 343 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 REG3GQ6UW15 175 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 STAC2Q6ZMT1 411 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 OR6T1Q8NGN1 323 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 VPS39Q96JC1 886 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 AKR1E2Q96JD6 320 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 C1orf147Q96MC9 270 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 RPP25Q9BUL9 199 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 SLC25A51Q9H1U9 297 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 GPN2Q9H9Y4 310 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 ELOVL2Q9NXB9 296 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 CGNQ9P2M7 1197 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 CYTH4Q9UIA0 394 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 CSAG2Q9Y5P2 127 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 DDX49Q9Y6V7 483 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 SPACA6W5XKT8 324 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 USP6P35125 1406 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 FER1L5A0AVI2 2057 aa3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 SF3B1O75533 1304 aaKnown RBP eCLIP3.42□□□□□ -1.86
CDC42BPA-211ENST00000466538 METP08581 1390 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 PPIAL4CA0A0B4J2A2 164 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 GSAPA4D1B5 854 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 LRRTM2O43300 516 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 DUX1O43812 170 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 GPRIN2O60269 458 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 GJB5O95377 273 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 IGHG3P01860 377 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 OPN1LWP04000 364 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 PPIAL4GP0DN37 164 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 FOLR2P14207 255 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 GATA1P15976 413 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 CAPN2P17655 700 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 SDC1P18827 310 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 ARHGDIBP52566 201 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 HMGCS2P54868 508 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 HSD17B7P56937 341 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 CSTF1Q05048 431 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 ZFP36L1Q07352 338 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 CYP51A1Q16850 503 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 SLC36A3Q495N2 470 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 MEDAGQ5VYS4 303 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 SLX4IPQ5VYV7 408 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 SULT1C3Q6IMI6 304 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms