RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 KRT6CP48668 564 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 ACTR1AP61163 376 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 COX10Q12887 443 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 BNIP1Q12981 228 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 TFDP1Q14186 410 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 EIF2B1Q14232 305 aaKnown RBP3.7□□□□□ -1.82
USP25-207ENST00000464435 TRIP10Q15642 601 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 CDKN3Q16667 212 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 MS4A13Q5J8X5 152 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 PRR5LQ6MZQ0 368 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 STOX1Q6ZVD7 989 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 Q7L0L9 218 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 GCNT2Q8N0V5 402 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 CSNK1G2-AS1Q8NCQ2 148 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 OR6T1Q8NGN1 323 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 CNDP1Q96KN2 507 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 RPP25Q9BUL9 199 aaKnown RBP3.7□□□□□ -1.82
USP25-207ENST00000464435 FICDQ9BVA6 458 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 ZNF416Q9BWM5 594 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 MRPL13Q9BYD1 178 aaKnown RBP3.7□□□□□ -1.82
USP25-207ENST00000464435 RPAP3Q9H6T3 665 aaPredicted RBP3.7□□□□□ -1.82
USP25-207ENST00000464435 GPN2Q9H9Y4 310 aaPredicted RBP3.7□□□□□ -1.82
USP25-207ENST00000464435 DUS2Q9NX74 493 aaKnown RBP3.7□□□□□ -1.82
USP25-207ENST00000464435 CIDEBQ9UHD4 219 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 B9D1Q9UPM9 204 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 MFHAS1Q9Y4C4 1052 aa3.7□□□□□ -1.82
USP25-207ENST00000464435 IGHV3OR16-12A0A075B7B8 117 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 TRABD2BA6NFA1 517 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 SGK1O00141 431 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 GALR3O60755 368 aaPredicted RBP3.69□□□□□ -1.82
USP25-207ENST00000464435 NUDT14O95848 222 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 MBD3O95983 291 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 HOXB7P09629 217 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 CALCBP10092 127 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 TOP1P11387 765 aaKnown RBP3.69□□□□□ -1.82
USP25-207ENST00000464435 FOLR2P14207 255 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 DPP4P27487 766 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 ARHGDIAP52565 204 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 ELP6Q0PNE2 266 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 OVGP1Q12889 678 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 RIPK1Q13546 671 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 ABRAXAS2Q15018 415 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 RABL6Q3YEC7 729 aaPredicted RBP3.69□□□□□ -1.82
USP25-207ENST00000464435 USH1GQ495M9 461 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 TMEM41BQ5BJD5 291 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 RIPPLY2Q5TAB7 128 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 TMUB2Q71RG4 321 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 ARMCX2Q7L311 632 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 POM121L12Q8N7R1 296 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 ART4Q93070 314 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 RAB7BQ96AH8 199 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 DTNBP1Q96EV8 351 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 DNAJA3Q96EY1 480 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 DHTKD1Q96HY7 919 aaPredicted RBP3.69□□□□□ -1.82
USP25-207ENST00000464435 PIWIL1Q96J94 861 aaKnown RBP3.69□□□□□ -1.82
USP25-207ENST00000464435 VSTM2LQ96N03 204 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 VPS35Q96QK1 796 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 TBC1D10AQ9BXI6 508 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 AGPAT5Q9NUQ2 364 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 RDH8Q9NYR8 311 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 KLRF1Q9NZS2 232 aa3.69□□□□□ -1.82
USP25-207ENST00000464435 TMEM110-MUSTN1A8MSY1 372 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 ZNF487B1APH4 448 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 NPIPA2E9PIF3 369 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 E2F3O00716 465 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 KLHL41O60662 606 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 ZNF253O75346 499 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 THRBP10828 461 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 SFTPCP11686 197 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 CASQ1P31415 396 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 BRCC3P46736 316 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 GBX2P52951 348 aaPredicted RBP3.68□□□□□ -1.82
USP25-207ENST00000464435 SH3BGRP55822 239 aaPredicted RBP3.68□□□□□ -1.82
USP25-207ENST00000464435 ZFP36L1Q07352 338 aaKnown RBP3.68□□□□□ -1.82
USP25-207ENST00000464435 CRMP1Q14194 572 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 ZIC1Q15915 447 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 TMEM52BQ4KMG9 183 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 LRRC23Q53EV4 343 aaPredicted RBP3.68□□□□□ -1.82
USP25-207ENST00000464435 BOLA3Q53S33 107 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 ASPHD2Q6ICH7 369 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 NIPAL3Q6P499 406 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 CBWD2Q8IUF1 395 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 SLC22A18ASQ8N1D0 253 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 FADS6Q8N9I5 356 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 OR52K2Q8NGK3 314 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 RFESDQ8TAC1 157 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 FNDC8Q8TC99 324 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 GIPC3Q8TF64 312 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 RASL10AQ92737 203 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 UPRTQ96BW1 309 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 TUBGCP3Q96CW5 907 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 HPDLQ96IR7 371 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 ERP44Q9BS26 406 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 TBCDQ9BTW9 1192 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 TRIM9Q9C026 710 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 AMBNQ9NP70 447 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 PALMDQ9NP74 551 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 UTP6Q9NYH9 597 aaKnown RBP3.68□□□□□ -1.82
USP25-207ENST00000464435 DHRS4-AS1Q9P1J3 65 aa3.68□□□□□ -1.82
USP25-207ENST00000464435 SNX6Q9UNH7 406 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms