RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ANGPTL3Q9Y5C1 460 aa7.48□□□□□ -1.21
ECHDC1-212ENST00000461239 CLDN16Q9Y5I7 305 aa7.48□□□□□ -1.21
ECHDC1-212ENST00000461239 MBD3L5A6NJ08 208 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 C9J4A7 227 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 AP4M1O00189 453 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 FOXE1O00358 373 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 SAP18O00422 153 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 PLPP1O14494 284 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 PRPF4O43172 522 aaKnown RBP eCLIP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 ERI3O43414 337 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 CHST10O43529 356 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 OTCP00480 354 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 PDYNP01213 254 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 BPGMP07738 259 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 CHN1P15882 459 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 CAPN3P20807 821 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 FOLR3P41439 243 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 AVPR1BP47901 424 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 HTR6P50406 440 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 HNRNPFP52597 415 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 PLA2G16P53816 162 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 TPTEP56180 551 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 SUMO2P61956 95 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 BTN3A2P78410 334 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 RGS1Q08116 209 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 LCP2Q13094 533 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 DDX39BQ13838 428 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 HERC3Q15034 1050 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 RBBP7Q16576 425 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 HIST2H2ACQ16777 129 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 KHDRBS2Q5VWX1 349 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 LIPMQ5VYY2 423 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 FRG2Q64ET8 278 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 HIST2H2AA3Q6FI13 130 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 FAAH2Q6GMR7 532 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 ACSM6Q6P461 480 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 KIRREL2Q6UWL6 708 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 ZCCHC23Q6ZST2 131 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 PTCHD4Q6ZW05 846 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 Q6ZWC4 215 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 CA13Q8N1Q1 262 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 TBC1D19Q8N5T2 526 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 CCNYL1Q8N7R7 359 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 OR2L5Q8NG80 312 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 ATP6V1E2Q96A05 226 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 PKNOX2Q96KN3 472 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 BBC3Q96PG8 261 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 FRG2BQ96QU4 278 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 HBEGFQ99075 208 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 SH3GL2Q99962 352 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 C17orf62Q9BQA9 187 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 MLST8Q9BVC4 326 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 C20orf27Q9GZN8 174 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 VN1R1Q9GZP7 353 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 CENPHQ9H3R5 247 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 ANKHQ9HCJ1 492 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 ZNF446Q9NWS9 450 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 PSD3Q9NYI0 1048 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 SENP1Q9P0U3 644 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 ZNF282Q9UDV7 671 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 CDC14AQ9UNH5 594 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 TIMM22Q9Y584 194 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 HS3ST3B1Q9Y662 390 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
ECHDC1-212ENST00000461239 MANBAO00462 879 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 CYR61O00622 381 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 PEX1O43933 1283 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 TMPRSS11DO60235 418 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 ALOX12BO75342 701 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 EEDO75530 441 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 SCELO95171 688 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 ESRRBO95718 433 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 CHRNGP07510 517 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 CSF1P09603 554 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 PEPDP12955 493 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF20P17024 532 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 MMP11P24347 488 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 ATP5A1P25705 553 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 CERS1P27544 350 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 PTGS2P35354 604 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 BSGP35613 385 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 XCR1P46094 333 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 MAGOHP61326 146 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 STXBP1P61764 594 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 BTG2P78543 158 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 PSG6Q00889 435 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 RHAGQ02094 409 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 TBL3Q12788 808 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 ABRAXAS2Q15018 415 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 DEFB109BQ30KR1 87 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 UGT3A2Q3SY77 523 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 TTMPQ5BVD1 217 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 TMEM205Q6UW68 189 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 GPRIN3Q6ZVF9 776 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 USP51Q70EK9 711 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 ABHD13Q7L211 337 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 MRGPREQ86SM8 312 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 SIRT6Q8N6T7 355 aa7.46□□□□□ -1.22
ECHDC1-212ENST00000461239 EXD3Q8N9H8 876 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms