RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ACOT9Q9Y305 439 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 RAP2CQ9Y3L5 183 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TCRBV21S2A2A0A5A6 115 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TSPAN11A1L157 253 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 C5orf52A6NGY3 159 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 FAM90A27PA6NNH2 459 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 LINC00587B1AMM8 73 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TRIM77I1YAP6 450 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 HCN1O60741 890 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 STX11O75558 287 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SCELO95171 688 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 CA3P07451 260 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 F7P08709 466 aaPredicted RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 NR2C1P13056 603 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 M6PRP20645 277 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 ACVR2AP27037 513 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 ARPP19P56211 112 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 NRG3P56975 720 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SNAPC1Q16533 368 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 CLEC6AQ6EIG7 209 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 LRRC8EQ6NSJ5 796 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 PRSS57Q6UWY2 283 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 PRR23BQ6ZRT6 265 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 CXXC5Q7LFL8 322 aaKnown RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 MFSD6LQ8IWD5 586 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 OIT3Q8WWZ8 545 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 HOXB13Q92826 284 aaPredicted RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 RMND5BQ96G75 393 aaPredicted RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF778Q96MU6 729 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TSSK3Q96PN8 268 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SLC2A11Q9BYW1 496 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SLC25A32Q9H2D1 315 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TMEM45AQ9NWC5 275 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 EIF3KQ9UBQ5 218 aaKnown RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 EIF3LQ9Y262 564 aaKnown RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 RASD1Q9Y272 281 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 YBX2Q9Y2T7 364 aaKnown RBP7.29□□□□□ -1.24
BRCC3-208ENST00000453705 SLC22A7Q9Y694 548 aa7.29□□□□□ -1.24
BRCC3-208ENST00000453705 TRAV19A0A0A6YYK7 116 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 KLRC4-KLRK1H3BQV0 150 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 SLC9A3R1O14745 358 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 CSO75390 466 aaKnown RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 MT-ND1P03886 318 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PNLIPP16233 465 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 DCTDP32321 178 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 NAA10P41227 235 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 RAP1GDS1P52306 607 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 STC1P52823 247 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PDK3Q15120 406 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 ETFDHQ16134 617 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 CCDC6Q16204 474 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 EOGTQ5NDL2 527 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 LYPLAL1Q5VWZ2 237 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 TTC23Q5W5X9 447 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 EPGNQ6UW88 154 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 ZBTB49Q6ZSB9 765 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 ACAD11Q709F0 780 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PIWIL4Q7Z3Z4 852 aaKnown RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 TFAP2DQ7Z6R9 452 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 SLC25A41Q8N5S1 370 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 RNF148Q8N7C7 305 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 GTF3AQ92664 365 aaKnown RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 CTRCQ99895 268 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 OMDQ99983 421 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 EPHX3Q9H6B9 360 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 UPB1Q9UBR1 384 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 ZFP69BQ9UJL9 534 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 SLC6A14Q9UN76 642 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 MRPS18BQ9Y676 258 aaKnown RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 TRBV5-4A0A0C4DH59 114 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 A0A1W2PRB8 838 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PRSS37A4D1T9 235 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PDZK1P1A8MUH7 402 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 SOX1O00570 391 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 SNAI2O43623 268 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 DUX1O43812 170 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 ATG13O75143 517 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PMPCBO75439 489 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 HAUS5O94927 633 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 OR4F21O95013 312 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 CD1AP06126 327 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 CD63P08962 238 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 MYL2P10916 166 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 G6PDP11413 515 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 EFNA1P20827 205 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 ATP4BP51164 291 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 NHLH1Q02575 133 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 POU6F1Q14863 301 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PLAC9Q5JTB6 97 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PDZK1Q5T2W1 519 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 C3orf33Q6P1S2 294 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 DHRS4L2Q6PKH6 230 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 RIPOR1Q6ZS17 1223 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 DMRTC2Q8IXT2 367 aaPredicted RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 PDPRQ8NCN5 879 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 OR10J5Q8NHC4 309 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 MRPS31Q92665 395 aaKnown RBP7.28□□□□□ -1.24
BRCC3-208ENST00000453705 WNT2BQ93097 391 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 VOPP1Q96AW1 172 aa7.28□□□□□ -1.24
BRCC3-208ENST00000453705 SPSB1Q96BD6 273 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms