RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CDR2LQ86X02 465 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 PHC2Q8IXK0 858 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 ICA1LQ8NDH6 482 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 SLCO2A1Q92959 643 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 ZNF300Q96RE9 604 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 ROPN1BQ9BZX4 212 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 HOXD1Q9GZZ0 328 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 IL1RL2Q9HB29 575 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 SGK2Q9HBY8 427 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 POLD4Q9HCU8 107 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 ZDHHC18Q9NUE0 388 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 MBD2Q9UBB5 411 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 GNG12Q9UBI6 72 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 TUBGCP4Q9UGJ1 667 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 IFT52Q9Y366 437 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 WDR45Q9Y484 360 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 CSNK1G3Q9Y6M4 447 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 MYH15Q9Y2K3 1946 aa4.23□□□□□ -1.73
HMGB1P26-201ENST00000452520 AFF2P51816 1311 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 ARPC4-TTLL3A0A0A6YYG9 625 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 GOLGA6L7A0A1B0GV03 622 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 LRIT2A6NDA9 550 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 NCF1BA6NI72 391 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 PCP4L1A6NKN8 68 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 NCF1CA8MVU1 366 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 TMCO5BA8MYB1 307 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 FOXE1O00358 373 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 BTN3A3O00478 584 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 CEACAM4O75871 244 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 OPN1LWP04000 364 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 RNF224P0DH78 156 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 ADORA3P0DMS8 318 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 SLC2A3P11169 496 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 GPR183P32249 361 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 MMP12P39900 470 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 CAPGP40121 348 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 MAGEA5P43359 124 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 ZFP36L2P47974 494 aaKnown RBP4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 FNTAP49354 379 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 PCK2Q16822 640 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 GGTA1PQ4G0N0 100 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 BCL7AQ4VC05 210 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 CELF3Q5SZQ8 465 aaKnown RBP4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 ZC2HC1BQ5TFG8 222 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 PRAMEF5Q5TYX0 476 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 PRAMEF6Q5VXH4 476 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 KCNIP4Q6PIL6 250 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 CHMP1BQ7LBR1 199 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 TMEM17Q86X19 198 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 SLC38A6Q8IZM9 456 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 BBOF1Q8ND07 529 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 OR9K2Q8NGE7 335 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 OR9Q2Q8NGE9 314 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 OR6F1Q8NGZ6 308 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 FBXO25Q8TCJ0 367 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 LHX4Q969G2 390 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 SH3YL1Q96HL8 342 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 ELMO2Q96JJ3 720 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 POM121L2Q96KW2 1035 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 AMDHD1Q96NU7 426 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 TGM7Q96PF1 710 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 CPXM1Q96SM3 734 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 OPRPNQ99935 248 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 OVOL2Q9BRP0 275 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 NUP58Q9BVL2 599 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 KLRF1Q9NZS2 232 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 SUN2Q9UH99 717 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 ASIC3Q9UHC3 531 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 PIGLQ9Y2B2 252 aa4.22□□□□□ -1.73
HMGB1P26-201ENST00000452520 IGLV7-46A0A075B6I9 117 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 A0A075B6Q4 140 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 NPIPB9F8W1W9 429 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 STX7O15400 261 aaKnown RBP4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 LRRTM2O43300 516 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 EFNA2O43921 213 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 DUS4LO95620 317 aaKnown RBP4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 CCDC159P0C7I6 412 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 PABPC4LP0CB38 370 aaKnown RBP4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 PRKACGP22612 351 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 RFC4P35249 363 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 BRCC3P46736 316 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 PGFP49763 221 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 KRTAP10-9P60411 292 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 EWSR1Q01844 656 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 GCKRQ14397 625 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 PPP1R7Q15435 360 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 SSX2Q16385 188 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 C14orf177Q52M58 125 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 ATL3Q6DD88 541 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 RHBDD2Q6NTF9 364 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 KDM7AQ6ZMT4 941 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 TRPM8Q7Z2W7 1104 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 ANKRD37Q7Z713 158 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 CATSPERDQ86XM0 798 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 ECHDC2Q86YB7 292 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 OTUD6BQ8N6M0 293 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 C17orf47Q8NEP4 570 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 NUP37Q8NFH4 326 aa4.21□□□□□ -1.74
HMGB1P26-201ENST00000452520 SLC2A14Q8TDB8 520 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms