RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 C1orf74Q96LT6 269 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 TRMT61BQ9BVS5 477 aaKnown RBP7.47□□□□□ -1.21
SMG1-202ENST00000446231 TMEM248Q9NWD8 314 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 UTS2RQ9UKP6 389 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 RCE1Q9Y256 329 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 SLC27A6Q9Y2P4 619 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 SCN2BO60939 215 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 GAREM2Q75VX8 874 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 HUS1BQ8NHY5 278 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 DDOQ99489 341 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 DZANK1Q9NVP4 752 aa7.47□□□□□ -1.21
SMG1-202ENST00000446231 KIAA1522Q9P206 1035 aaPredicted RBP7.47□□□□□ -1.21
SMG1-202ENST00000446231 TNFRSF1BP20333 461 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 ARL4DP49703 201 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 TPGS1Q6ZTW0 290 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 SYT17Q9BSW7 474 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.46□□□□□ -1.21
SMG1-202ENST00000446231 ISYNA1Q9NPH2 558 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 PSMD9O00233 223 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 ETFAP13804 333 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 NAA10P41227 235 aaPredicted RBP7.46□□□□□ -1.21
SMG1-202ENST00000446231 MAP2K6P52564 334 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 ACTC1P68032 377 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 ACTA1P68133 377 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 RNF212Q495C1 297 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 GRHL2Q6ISB3 625 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 C1QTNF7Q9BXJ2 289 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 RXFP3Q9NSD7 469 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 AMY2AP04746 511 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 HCCSP53701 268 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 PLEKHN1Q494U1 663 aaPredicted RBP7.46□□□□□ -1.21
SMG1-202ENST00000446231 SOHLH1Q5JUK2 328 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 SLC6A19Q695T7 634 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 PHB2Q99623 299 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 TGIF2Q9GZN2 237 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 UNKLQ9H9P5 680 aaKnown RBP7.46□□□□□ -1.21
SMG1-202ENST00000446231 TMEM184CQ9NVA4 438 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 PCDH8O95206 1070 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 ATCAYQ86WG3 371 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 SLC16A10Q8TF71 515 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 C16orf78Q8WTQ4 265 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 RNF39Q9H2S5 420 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 CKBP12277 381 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 ATP1B2P14415 290 aaPredicted RBP7.46□□□□□ -1.21
SMG1-202ENST00000446231 S100A11P31949 105 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 HTR6P50406 440 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 GPR17Q13304 367 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 TMEM163Q8TC26 289 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 SLC6A7Q99884 636 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 TNFRSF12AQ9NP84 129 aa7.46□□□□□ -1.21
SMG1-202ENST00000446231 AGR2O95994 175 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 PCMT1P22061 227 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ADRA1AP35348 466 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ADCYAP1R1P41586 468 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 IFITM2Q01629 132 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 UGT3A2Q3SY77 523 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 NLGN2Q8NFZ4 835 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ATOH8Q96SQ7 321 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 MED31Q9Y3C7 131 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 AFDNP55196 1824 aaKnown RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 TEX13DA0A0J9YY54 714 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 FAM230AA0A1W2PPH8 454 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 SORDQ00796 357 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 IFITM3Q01628 133 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 PDZK1IP1Q13113 114 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 NLGN4YQ8NFZ3 816 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 PCYT2Q99447 389 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 TOLLIPQ9H0E2 274 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 CCDC88AQ3V6T2 1871 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ARL5CA6NH57 179 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 SPI1P17947 270 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 RFX2P48378 723 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 NDUFA6P56556 154 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 TLE2Q04725 743 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 LRRC69Q6ZNQ3 347 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 STEAP2Q8NFT2 490 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 UCN3Q969E3 161 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 EVA1BQ9NVM1 165 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 CYB5R1Q9UHQ9 305 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 PTPRQQ9UMZ3 2332 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 I6L893 689 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 BDKRB2P30411 391 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 NKX3-2P78367 333 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 BEX3Q00994 111 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 OC90Q02509 493 aaPredicted RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 HYAL2Q12891 473 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 KIAA1211LQ6NV74 962 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 C6orf120Q7Z4R8 191 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 OOSP2Q86WS3 158 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 AUTS2Q8WXX7 1259 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 YIPF5Q969M3 257 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 PLD4Q96BZ4 506 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 SLC19A3Q9BZV2 496 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 SLAMF7Q9NQ25 335 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 PCDHGA6Q9Y5G7 932 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 ZNF98A6NK75 572 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 RNASET2O00584 256 aaKnown RBP7.46□□□□□ -1.22
SMG1-202ENST00000446231 CTRB1P17538 263 aa7.46□□□□□ -1.22
SMG1-202ENST00000446231 IL1RNP18510 177 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms