RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 HSD3B1P14060 373 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 PTPN2P17706 415 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 POLR2CP19387 275 aaPredicted RBP11.37□□□□□ -0.59
APLF-203ENST00000445692 ELK1P19419 428 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 CSRP3P50461 194 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 CCR8P51685 355 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 SWI5Q1ZZU3 235 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 SYT14P1Q58G82 188 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 LIN54Q6MZP7 749 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 FAAP20Q6NZ36 180 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 COX18Q8N8Q8 333 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 RASGEF1AQ8N9B8 481 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 OR2T33Q8NG76 320 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 NXPE2Q96DL1 559 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 PITX2Q99697 317 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 MCCC2Q9HCC0 563 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 PHF11Q9UIL8 331 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 COPS3Q9UNS2 423 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 SIPA1L1O43166 1804 aa11.37□□□□□ -0.59
APLF-203ENST00000445692 ANKRD61A6NGH8 418 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 LGALS8O00214 317 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 PPM1DO15297 605 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 HMGN1P05114 100 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 C1SP09871 688 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 UBL4AP11441 157 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 SLC1A3P43003 542 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 LIM2P55344 173 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 WNT3P56703 355 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 LINC00299Q6ZSB3 139 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 RTN4RL1Q86UN2 441 aaPredicted RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 TMC8Q8IU68 726 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 FOXRED2Q8IWF2 684 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 BBS1Q8NFJ9 593 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 OR4K13Q8NH42 304 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 MOSPD2Q8NHP6 518 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 FLVCR2Q9UPI3 526 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 RCE1Q9Y256 329 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 MANSC4A6NHS7 340 aaPredicted RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 PRICKLE3O43900 615 aaPredicted RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 MTRF1O75570 445 aaKnown RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 SLC22A5O76082 557 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 MT-ND5P03915 603 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 ERVFC1P60507 584 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 TLE2Q04725 743 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 HSD17B12Q53GQ0 312 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 C18orf63Q68DL7 685 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 LRRN1Q6UXK5 716 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 PGBD3Q8N328 593 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 SLC44A3Q8N4M1 653 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 L3MBTL4Q8NA19 623 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 CHST4Q8NCG5 386 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 OR13C5Q8NGS8 318 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 TSEN15Q8WW01 171 aaKnown RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 LMLNQ96KR4 655 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 DDOQ99489 341 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 DPH7Q9BTV6 452 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 GABARAPL3Q9BY60 117 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 FANCFQ9NPI8 374 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 TDP1Q9NUW8 608 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 FARSAQ9Y285 508 aaKnown RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 WDR90Q96KV7 1748 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 ANXA2P2A6NMY6 339 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 LEFTY2O00292 366 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 PRAMEF4O60810 478 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 RPLP2P05387 115 aaKnown RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 ANXA2P07355 339 aaKnown RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 MPC1LP0DKB6 136 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 PKLRP30613 574 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 CD79BP40259 229 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 XCR1P46094 333 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 UBE2MP61081 183 aaKnown RBP11.36□□□□□ -0.59
APLF-203ENST00000445692 SP140Q13342 867 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 PLK5Q496M5 336 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 PRAMEF9Q5VWM5 478 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 NANOGP1Q8N7R0 232 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 GATSQ8NAP1 163 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 OR5J2Q8NH18 312 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 FANK1Q8TC84 345 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 GNPDA2Q8TDQ7 276 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 TMEM27Q9HBJ8 222 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 ATP13A2Q9NQ11 1180 aa11.36□□□□□ -0.59
APLF-203ENST00000445692 TRIM64A6NGJ6 449 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 ECDO95905 644 aaPredicted RBP11.35□□□□□ -0.59
APLF-203ENST00000445692 IFNGP01579 166 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 FURINP09958 794 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 RAB3BP20337 219 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 ITGA3P26006 1051 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 ACVR2AP27037 513 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 TCTN3Q6NUS6 607 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 RTL4Q6ZR62 310 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 ZER1Q7Z7L7 766 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 ZBTB44Q8NCP5 570 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 NUS1Q96E22 293 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 GABARAPL1Q9H0R8 117 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 PCDHB16Q9NRJ7 776 aa11.35□□□□□ -0.59
APLF-203ENST00000445692 TAS2R3Q9NYW6 316 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms