RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ASB4Q9Y574 426 aa11.02□□□□□ -0.64
SMPD4-209ENST00000439886 PLXNA1Q9UIW2 1896 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 FXYD6-FXYD2A0A087WZ82 144 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 A0A0U1RQF3 1178 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 TCRBV16S1A1N1A0A5B0 115 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 C1orf226A1L170 272 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 TMEM229AB2RXF0 380 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 PIP5K1CO60331 668 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 POP4O95707 220 aaKnown RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF8P17098 575 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 STARP49675 285 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 GATMP50440 423 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ERVK-25P63136 954 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 TLE2Q04725 743 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 SNTB2Q13425 540 aaKnown RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ALKBH1Q13686 389 aaKnown RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 SLC6A19Q695T7 634 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 TCTN3Q6NUS6 607 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 C11orf88Q6PI97 169 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 MACC1Q6ZN28 852 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ADGRF3Q8IZF5 1079 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 GPC2Q8N158 579 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 KLHL36Q8N4N3 616 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 L3MBTL4Q8NA19 623 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 WFDC5Q8TCV5 224 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ASB11Q8WXH4 323 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ADAMTS14Q8WXS8 1223 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 GSX2Q9BZM3 304 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 SLC6A16Q9GZN6 736 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 FXYD6Q9H0Q3 95 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 PPP1R3EQ9H7J1 279 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 RDH14Q9HBH5 336 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 POLE3Q9NRF9 147 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 GSN-AS1Q9NRJ2 163 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 C1GALT1Q9NS00 363 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 LHX3Q9UBR4 397 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF69Q9UC07 566 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ZC3H12DA2A288 527 aaKnown RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 MTMR11A4FU01 709 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 H7C0S8 307 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 REM1O75628 298 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 TPOP07202 933 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 MMP11P24347 488 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ITGB7P26010 798 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 PGDP52209 483 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 LINGO2Q7L985 606 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 KRT78Q8N1N4 520 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 DUSP18Q8NEJ0 188 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 FAM46AQ96IP4 442 aaKnown RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF607Q96SK3 696 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 GINS4Q9BRT9 223 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 FBXW2Q9UKT8 454 aa11.02□□□□□ -0.65
SMPD4-209ENST00000439886 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
SMPD4-209ENST00000439886 KCNE1BA0A087WTH5 132 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 FAM170BA6NMN3 283 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 H3BSH0 61 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 FAAHO00519 579 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 BRINP1O60477 761 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 STC2O76061 302 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SIX6O95475 246 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 IGSF6O95976 241 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 F11P03951 625 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 ACSM4P0C7M7 580 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 ATP1B2P14415 290 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 ACADLP28330 430 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 GPR4P46093 362 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 RNF4P78317 190 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 GPR33Q49SQ1 333 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 LYPLAL1Q5VWZ2 237 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 CDC73Q6P1J9 531 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SLC36A4Q6YBV0 504 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SIAH3Q8IW03 269 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SERPINA12Q8IW75 414 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 C16orf78Q8WTQ4 265 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 KLK6Q92876 244 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 ZDHHC12Q96GR4 267 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 FUBP3Q96I24 572 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 ZSWIM3Q96MP5 696 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SFXN2Q96NB2 322 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 NPAS1Q99742 590 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 PLA2G12AQ9BZM1 189 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 OR51I1Q9H343 314 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 MED20Q9H944 212 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SDHAF2Q9NX18 166 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 MGAT4CQ9UBM8 478 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 PLAGL1Q9UM63 463 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SHISA3A0PJX4 238 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 CA12O43570 354 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 PIPP12273 146 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 HOXB9P17482 250 aaPredicted RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 PPP2R1BP30154 601 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 GABRA5P31644 462 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 OR1D2P34982 312 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 PITPNBP48739 271 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SNRPGP62308 76 aaKnown RBP11.01□□□□□ -0.65
SMPD4-209ENST00000439886 COL28A1Q2UY09 1125 aa11.01□□□□□ -0.65
SMPD4-209ENST00000439886 SPIN4Q56A73 249 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms