RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 P4HA3Q7Z4N8 544 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 YTHDF3Q7Z739 585 aaKnown RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 LUZP2Q86TE4 346 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 MYLK4Q86YV6 388 aaPredicted RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 PPM1NQ8N819 430 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 ZNF611Q8N823 705 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 FADS6Q8N9I5 356 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 GFM2Q969S9 779 aaKnown RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 METTL2AQ96IZ6 378 aaKnown RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 SFXN2Q96NB2 322 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 CCL19Q99731 98 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 NAPGQ99747 312 aaPredicted RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 PIGQQ9BRB3 760 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 MED18Q9BUE0 208 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 ELOVL6Q9H5J4 265 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 NOL11Q9H8H0 719 aaKnown RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 GP6Q9HCN6 339 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 TRMT1Q9NXH9 659 aaKnown RBP7.48□□□□□ -1.21
CDH13-203ENST00000431540 VPS29Q9UBQ0 182 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 BCAP29Q9UHQ4 241 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 MCM8Q9UJA3 840 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 GRID1Q9ULK0 1009 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 MAPRE3Q9UPY8 281 aa7.48□□□□□ -1.21
CDH13-203ENST00000431540 A0A096LPK6 155 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 IGLV3-32A0A0A0MS00 114 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 WASHC1A8K0Z3 465 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 OR7A17O14581 309 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 TLX2O43763 284 aaPredicted RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 SMIM24O75264 130 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 SH3BGRLO75368 114 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 CRLF1O75462 422 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 REM1O75628 298 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 CNOT4O95628 575 aaKnown RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 CBX7O95931 251 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 TGM6O95932 706 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 IFNA2P01563 188 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 POU2F1P14859 743 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 GRK2P25098 689 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 PHBP35232 272 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 THBS2P35442 1172 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 SOX18P35713 384 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 SERPINB8P50452 374 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 SERPINB9P50453 376 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 NEK2P51955 445 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 AGFG1P52594 562 aaKnown RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 B3GALT5-AS1P59052 145 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 FAM27E3Q08E93 113 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 C17orf67Q0P5P2 114 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 CSTF3Q12996 717 aaKnown RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 ERCC6LQ2NKX8 1250 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 ZNF628Q5EBL2 1059 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 C1QTNF12Q5T7M4 302 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 PODNL1Q6PEZ8 512 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 ZNF474Q6S9Z5 364 aaPredicted RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 TMEM64Q6YI46 380 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 BEND4Q6ZU67 534 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 FAM214BQ7L5A3 538 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 COMMD6Q7Z4G1 85 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 PRIMA1Q86XR5 153 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 METTL25Q8N6Q8 603 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 OR6K3Q8NGY3 331 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 PPP1R14CQ8TAE6 165 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 FBF1Q8TES7 1133 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 TMEM171Q8WVE6 324 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 GMPPAQ96IJ6 420 aaPredicted RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 ZNF845Q96IR2 970 aaPredicted RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 Q96MF0 132 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 VSTM2LQ96N03 204 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 SMR3AQ99954 134 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 MRPL57Q9BQC6 102 aaKnown RBP7.47□□□□□ -1.21
CDH13-203ENST00000431540 TMEM204Q9BSN7 226 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 ITPAQ9BY32 194 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 BRINP2Q9C0B6 783 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 C3orf14Q9HBI5 128 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 NGBQ9NPG2 151 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 SERHLQ9NQF3 203 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 GIMAP4Q9NUV9 329 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 GPR52Q9Y2T5 361 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 PLLPQ9Y342 182 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 PRR14LQ5THK1 2151 aa7.47□□□□□ -1.21
CDH13-203ENST00000431540 CR1P17927 2039 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 CADP27708 2225 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 A0A087WZY1 265 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 C7orf72A4D263 438 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 H7C1Q1 480 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 FADS1O60427 444 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 COQ9O75208 318 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 PRKRAO75569 313 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 ERAL1O75616 437 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 HSPA4LO95757 839 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 KRT6AP02538 564 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 KRT6BP04259 564 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 NGFRP08138 427 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 PABPC4LP0CB38 370 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 ZNF17P17021 662 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 LOXP28300 417 aaPredicted RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 IL12BP29460 328 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 IDUAP35475 653 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 MAGEA12P43365 314 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms