RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
CPNE4-201ENST00000429747 PLK5Q496M5 336 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 BEST4Q8NFU0 473 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 OPALINQ96PE5 141 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 HOXD1Q9GZZ0 328 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 CREBZFQ9NS37 354 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 RASD1Q9Y272 281 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 SLC22A31A6NKX4 558 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 BLOC1S5-TXNDC5H3BN57 136 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 GABRPO00591 440 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 KDM4BO94953 1096 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 SLC6A6P31641 620 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 GABRA3P34903 492 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 KCNJ5P48544 419 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 CTBP2P56545 445 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 NNATQ16517 81 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 TMEM35AQ53FP2 167 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 ACOT4Q8N9L9 421 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 ADAMTS19Q8TE59 1207 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 CREB3L1Q96BA8 519 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 SLC22A18Q96BI1 424 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 NEURL3Q96EH8 262 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 LYSMD1Q96S90 227 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 THAP7Q9BT49 309 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-201ENST00000429747 RANBP3Q9H6Z4 567 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-201ENST00000429747 TAAR2Q9P1P5 351 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 XKRYO14609 159 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 POLR1CO15160 346 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-201ENST00000429747 CD160O95971 181 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 GKN3PP0CG01 181 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 POLR2CP19387 275 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-201ENST00000429747 GRPRP30550 384 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 HYAL2Q12891 473 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 CDK10Q15131 360 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 BAK1Q16611 211 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 AKIRIN2Q53H80 203 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 FAM205BPQ63HN1 556 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 ZNF767PQ75MW2 155 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 GPALPP1Q8IXQ4 340 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 LRRC25Q8N386 305 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-201ENST00000429747 NKD1Q969G9 470 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 HSPA12BQ96MM6 686 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 POLDIP3Q9BY77 421 aaKnown RBP11.9□□□□□ -0.5
CPNE4-201ENST00000429747 PELI2Q9HAT8 420 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 NANSQ9NR45 359 aa11.9□□□□□ -0.5
CPNE4-201ENST00000429747 NPIPA5A0A0B4J1W7 369 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 NPIPA7E9PJI5 369 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 GYPBP06028 91 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 NPIPA8P0DM63 369 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 RAB3BP20337 219 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 SLC1A3P43003 542 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 HSD17B12Q53GQ0 312 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 CLDN22Q8N7P3 220 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 OR2T35Q8NGX2 323 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ADAD1Q96M93 576 aaKnown RBP11.89□□□□□ -0.51
CPNE4-201ENST00000429747 PINK1Q9BXM7 581 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ABCG4Q9H172 646 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 TMEM5Q9Y2B1 443 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 HEBP2Q9Y5Z4 205 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 TRBV2A0A0J9YWF9 115 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 PLPP1O14494 284 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 SSX4O60224 188 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 CTSAP10619 480 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 AHCYP23526 432 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 TGFBR2P37173 567 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ETV5P41161 510 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 PITPNBP48739 271 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ETV1P50549 477 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 MINDY4Q4G0A6 757 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 FLYWCH1Q4VC44 716 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 TCTN3Q6NUS6 607 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 CAMKVQ8NCB2 501 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 OR5H6Q8NGV6 325 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 OR2L2Q8NH16 312 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 OR4K13Q8NH42 304 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 MOSPD2Q8NHP6 518 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ZSWIM3Q96MP5 696 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 MCCC1Q96RQ3 725 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-201ENST00000429747 COMMD4Q9H0A8 199 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 MED20Q9H944 212 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 FZD3Q9NPG1 666 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 RBFOX1Q9NWB1 397 aaKnown RBP11.89□□□□□ -0.51
CPNE4-201ENST00000429747 DIMT1Q9UNQ2 313 aaKnown RBP11.89□□□□□ -0.51
CPNE4-201ENST00000429747 INSL6Q9Y581 213 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ELOA3DA6NLF2 546 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-201ENST00000429747 MCIDASD6RGH6 385 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 CSN2P05814 226 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 PSMA6P60900 246 aaKnown RBP11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ZNF750Q32MQ0 723 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ELOA3BQ3SY89 546 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 SYT14P1Q58G82 188 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 CCNJQ5T5M9 372 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ACSM5Q6NUN0 579 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 TAF8Q7Z7C8 310 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 NANOGP1Q8N7R0 232 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ELOA3Q8NG57 546 aa11.89□□□□□ -0.51
CPNE4-201ENST00000429747 ACOT11Q8WXI4 607 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-201ENST00000429747 TM4SF18Q96CE8 201 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms