RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TMCO6Q96DC7 493 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 FAM120BQ96EK7 910 aaKnown RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 RMND5BQ96G75 393 aaPredicted RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 MS4A4EQ96PG1 132 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 VKORC1Q9BQB6 163 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 RTN4RQ9BZR6 473 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 TP63Q9H3D4 680 aaPredicted RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 CXorf36Q9H7Y0 433 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 MEAF6Q9HAF1 191 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 Q9N2J8 555 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 ZCCHC3Q9NUD5 404 aaKnown RBP12.43□□□□□ -0.42
SNX3-204ENST00000426155 ASIC5Q9NY37 505 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 FBXL2Q9UKC9 423 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 FAM215AQ9Y5M1 114 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 WIF1Q9Y5W5 379 aa12.43□□□□□ -0.42
SNX3-204ENST00000426155 MAST4O15021 2626 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 OR14I1A6ND48 311 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 KDM4EB2RXH2 506 aaPredicted RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 SDHDO14521 159 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 BCKDKO14874 412 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 EMC8O43402 210 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 HCN1O60741 890 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 HPNP05981 417 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 IFI6P09912 130 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 H2AFXP16104 143 aaPredicted RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 PRPS1L1P21108 318 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 EVI2BP34910 448 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 RPL3P39023 403 aaKnown RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 DCTP40126 519 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 MAP3K8P41279 467 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 SLC18A1P54219 525 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 GAS1P54826 345 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 NME5P56597 212 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 OCRLQ01968 901 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 STX5Q13190 355 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 MAD2L1Q13257 205 aaPredicted RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 EFR3AQ14156 821 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 ZNHIT3Q15649 155 aaPredicted RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 DUSP5Q16690 384 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 PGS1Q32NB8 556 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 RTL6Q6ICC9 239 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 OR4F3Q6IEY1 312 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 MFSD12Q6NUT3 480 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 RPTNQ6XPR3 784 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 MAVSQ7Z434 540 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 ZAR1Q86SH2 424 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 CLECL1Q8IZS7 167 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 CLEC4FQ8N1N0 589 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 SLC16A11Q8NCK7 471 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 FAM83FQ8NEG4 500 aaPredicted RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 OR5AK3PQ8NH89 298 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 GPR151Q8TDV0 419 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 PHF10Q8WUB8 498 aaKnown RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 HOXB13Q92826 284 aaPredicted RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 COQ8BQ96D53 544 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 DUSP26Q9BV47 211 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 WDR55Q9H6Y2 383 aaPredicted RBP12.42□□□□□ -0.42
SNX3-204ENST00000426155 MANSC1Q9H8J5 431 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 ACKR4Q9NPB9 350 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 THAP1Q9NVV9 213 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 QPCTLQ9NXS2 382 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 ALKBH4Q9NXW9 302 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 ACAD8Q9UKU7 415 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 SNX8Q9Y5X2 465 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 HCFC1P51610 2035 aa12.42□□□□□ -0.42
SNX3-204ENST00000426155 C9JVG2 144 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 NKX2-2O95096 273 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 SNUPNO95149 360 aaKnown RBP12.41□□□□□ -0.42
SNX3-204ENST00000426155 IL33O95760 270 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 LBPP18428 481 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 ELAVL4P26378 380 aaKnown RBP12.41□□□□□ -0.42
SNX3-204ENST00000426155 ACVR2AP27037 513 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 EPHA3P29320 983 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 SOAT1P35610 550 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 SMSP52788 366 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 WNT3P56703 355 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 CLDN8P56748 225 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 NUP107P57740 925 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 MRPS22P82650 360 aaKnown RBP12.41□□□□□ -0.42
SNX3-204ENST00000426155 CRYZQ08257 329 aaKnown RBP12.41□□□□□ -0.42
SNX3-204ENST00000426155 SNTA1Q13424 505 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 LASP1Q14847 261 aaKnown RBP12.41□□□□□ -0.42
SNX3-204ENST00000426155 MLC1Q15049 377 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 DECR1Q16698 335 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 CYP27C1Q4G0S4 372 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 CCNJQ5T5M9 372 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 FIGNL1Q6PIW4 674 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 CCDC71Q8IV32 467 aaPredicted RBP12.41□□□□□ -0.42
SNX3-204ENST00000426155 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
SNX3-204ENST00000426155 JADE3Q92613 823 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 SARAFQ96BY9 339 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 SDCCAG3Q96C92 435 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 MARK4Q96L34 752 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 ATP6V1G3Q96LB4 118 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 ATAD3AQ9NVI7 634 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 FBXO34Q9NWN3 711 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 NTMQ9P121 344 aa12.41□□□□□ -0.42
SNX3-204ENST00000426155 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
SNX3-204ENST00000426155 FIGNL2A6NMB9 653 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms