RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 C21orf58P58505 322 aa10□□□□□ -0.81
USP49-204ENST00000423567 GAB1Q13480 694 aa10□□□□□ -0.81
USP49-204ENST00000423567 DESI1Q6ICB0 168 aa10□□□□□ -0.81
USP49-204ENST00000423567 ZNF585AQ6P3V2 769 aa10□□□□□ -0.81
USP49-204ENST00000423567 ZCCHC12Q6PEW1 402 aa10□□□□□ -0.81
USP49-204ENST00000423567 BHLHB9Q6PI77 547 aa10□□□□□ -0.81
USP49-204ENST00000423567 C3P1Q6ZMU1 363 aa10□□□□□ -0.81
USP49-204ENST00000423567 WDR53Q7Z5U6 358 aaPredicted RBP10□□□□□ -0.81
USP49-204ENST00000423567 RIMKLAQ8IXN7 391 aa10□□□□□ -0.81
USP49-204ENST00000423567 VPS37AQ8NEZ2 397 aa10□□□□□ -0.81
USP49-204ENST00000423567 OR56A1Q8NGH5 318 aa10□□□□□ -0.81
USP49-204ENST00000423567 OR5M9Q8NGP3 310 aa10□□□□□ -0.81
USP49-204ENST00000423567 NEIL3Q8TAT5 605 aa10□□□□□ -0.81
USP49-204ENST00000423567 DYDC1Q8WWB3 177 aa10□□□□□ -0.81
USP49-204ENST00000423567 JADE3Q92613 823 aa10□□□□□ -0.81
USP49-204ENST00000423567 MOAP1Q96BY2 351 aa10□□□□□ -0.81
USP49-204ENST00000423567 COQ8BQ96D53 544 aa10□□□□□ -0.81
USP49-204ENST00000423567 RMND5BQ96G75 393 aaPredicted RBP10□□□□□ -0.81
USP49-204ENST00000423567 GNRHR2Q96P88 292 aa10□□□□□ -0.81
USP49-204ENST00000423567 SLC6A15Q9H2J7 730 aa10□□□□□ -0.81
USP49-204ENST00000423567 HHATLQ9HCP6 504 aa10□□□□□ -0.81
USP49-204ENST00000423567 GALNT9Q9HCQ5 603 aa10□□□□□ -0.81
USP49-204ENST00000423567 SDHAF3Q9NRP4 125 aa10□□□□□ -0.81
USP49-204ENST00000423567 ALKBH4Q9NXW9 302 aa10□□□□□ -0.81
USP49-204ENST00000423567 COQ3Q9NZJ6 369 aa10□□□□□ -0.81
USP49-204ENST00000423567 NTMQ9P121 344 aa10□□□□□ -0.81
USP49-204ENST00000423567 PPP4R1LQ9P1A2 415 aa10□□□□□ -0.81
USP49-204ENST00000423567 MARCOQ9UEW3 520 aaPredicted RBP10□□□□□ -0.81
USP49-204ENST00000423567 PCDHGB4Q9UN71 923 aa10□□□□□ -0.81
USP49-204ENST00000423567 ABCG2Q9UNQ0 655 aa10□□□□□ -0.81
USP49-204ENST00000423567 WIF1Q9Y5W5 379 aa10□□□□□ -0.81
USP49-204ENST00000423567 HECTD1Q9ULT8 2610 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 HMGB1P1B2RPK0 211 aaPredicted RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 KLF11O14901 512 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 SCO2O43819 266 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 WDR1O75083 606 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 SOX30O94993 753 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 NKX2-2O95096 273 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 CLDN1O95832 211 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 C6orf47O95873 294 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 HOXD4P09016 255 aaPredicted RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 CYP4B1P13584 511 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 GABRA1P14867 456 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 H2AFXP16104 143 aaPredicted RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 ACVR2AP27037 513 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PTPN6P29350 595 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 EVI2BP34910 448 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PTGER4P35408 488 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 SOAT1P35610 550 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PTGDSP41222 190 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 KIR3DL1P43629 444 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 CCT3P49368 545 aaKnown RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 PRR20EP86478 221 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PRR20CP86479 221 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PRR20DP86480 221 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PRR20BP86481 221 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PRR20AP86496 221 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 ART3Q13508 389 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 TP53BP2Q13625 1128 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 SF3B4Q15427 424 aaKnown RBP eCLIP9.99□□□□□ -0.81
USP49-204ENST00000423567 DPY19L1Q2PZI1 675 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 ANXA8L1Q5VT79 327 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 FNDC7Q5VTL7 733 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 NXNQ6DKJ4 435 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 OGFOD2Q6N063 350 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 MFSD12Q6NUT3 480 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 ACAD11Q709F0 780 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 SPATA19Q7Z5L4 167 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 CAMKMTQ7Z624 323 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PLCZ1Q86YW0 608 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 COX18Q8N8Q8 333 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 OR4K17Q8NGC6 315 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 FBXO30Q8TB52 745 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 SFXN5Q8TD22 340 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 LRRC8CQ8TDW0 803 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 ITLN2Q8WWU7 325 aaPredicted RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 ZNF75CPQ92670 426 aaPredicted RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 FAM120BQ96EK7 910 aaKnown RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 TBL1XR1Q9BZK7 514 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 UBQLN3Q9H347 655 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 ACBD3Q9H3P7 528 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 SERHLQ9NQF3 203 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 PNPLA3Q9NST1 481 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 FAM120CQ9NX05 1096 aaKnown RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 TNFRSF10DQ9UBN6 386 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 DKKL1Q9UK85 242 aa9.99□□□□□ -0.81
USP49-204ENST00000423567 FAF1Q9UNN5 650 aaPredicted RBP9.99□□□□□ -0.81
USP49-204ENST00000423567 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 GOLGA8QA0A0J9YX86 632 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 GXYLT2A0PJZ3 443 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 GOLGA8OA6NCC3 632 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 FAM47E-STBD1D6RA91 191 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 PRSS44E7EML9 344 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 GOLGA8NF8WBI6 632 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 SDHDO14521 159 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 HMGN2P05204 90 aaKnown RBP9.98□□□□□ -0.81
USP49-204ENST00000423567 HPGDP15428 266 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 ADORA2A-AS1P86434 159 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 OCRLQ01968 901 aa9.98□□□□□ -0.81
USP49-204ENST00000423567 LASP1Q14847 261 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms