RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 C1orf52Q8N6N3 182 aaKnown RBP13.84□□□□□ -0.19
DDX56-202ENST00000415758 METTL25Q8N6Q8 603 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 ZNF611Q8N823 705 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 TMEM204Q9BSN7 226 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 DSN1Q9H410 356 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 FOLH1BQ9HBA9 442 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 SDHAF3Q9NRP4 125 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 PPP4R1LQ9P1A2 415 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 SNX6Q9UNH7 406 aa13.84□□□□□ -0.19
DDX56-202ENST00000415758 OR2M5A3KFT3 312 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 C17orf51A8MQB3 221 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 OTCP00480 354 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 HK1P19367 917 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 TCEA1P23193 301 aaKnown RBP13.83□□□□□ -0.2
DDX56-202ENST00000415758 SERPINB8P50452 374 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 CLDN20P56880 219 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 PSG6Q00889 435 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 TNK1Q13470 666 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 PON3Q15166 354 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 ERCC6LQ2NKX8 1250 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 RAET1LQ5VY80 246 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 ANKRD34AQ69YU3 496 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 ZNF704Q6ZNC4 412 aaPredicted RBP13.83□□□□□ -0.2
DDX56-202ENST00000415758 OR4N2Q8NGD1 307 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 OR9A2Q8NGT5 310 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 SELENOMQ8WWX9 145 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 NANOS1Q8WY41 292 aaKnown RBP13.83□□□□□ -0.2
DDX56-202ENST00000415758 KAT2AQ92830 837 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 EFHD2Q96C19 240 aaPredicted RBP13.83□□□□□ -0.2
DDX56-202ENST00000415758 KLHL4Q9C0H6 718 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 STMN4Q9H169 189 aaPredicted RBP13.83□□□□□ -0.2
DDX56-202ENST00000415758 TAS2R9Q9NYW1 312 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 VPS29Q9UBQ0 182 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 MCM8Q9UJA3 840 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 ABCG2Q9UNQ0 655 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 CUBNO60494 3623 aa13.83□□□□□ -0.2
DDX56-202ENST00000415758 ABCA1O95477 2261 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 PPP6CO00743 305 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 HS3ST1O14792 307 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 NME6O75414 186 aaPredicted RBP13.82□□□□□ -0.2
DDX56-202ENST00000415758 RPS17P08708 135 aaKnown RBP13.82□□□□□ -0.2
DDX56-202ENST00000415758 FCGR2AP12318 317 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 ATP5J2P56134 94 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 RPS3AP61247 264 aaKnown RBP13.82□□□□□ -0.2
DDX56-202ENST00000415758 LETMD1Q6P1Q0 360 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 ZDHHC24Q6UX98 284 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 STAC2Q6ZMT1 411 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 CCDC25Q86WR0 208 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 SLC44A2Q8IWA5 706 aaPredicted RBP13.82□□□□□ -0.2
DDX56-202ENST00000415758 SPATA4Q8NEY3 305 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 UHMK1Q8TAS1 419 aaKnown RBP13.82□□□□□ -0.2
DDX56-202ENST00000415758 GFM2Q969S9 779 aaKnown RBP13.82□□□□□ -0.2
DDX56-202ENST00000415758 C1QTNF3Q9BXJ4 246 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 RTN4RQ9BZR6 473 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 OR10A4Q9H209 315 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 VPS11Q9H270 941 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 PTGES2Q9H7Z7 377 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 MED11Q9P086 117 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 ZNF225Q9UK10 706 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 UTP11Q9Y3A2 253 aaKnown RBP13.82□□□□□ -0.2
DDX56-202ENST00000415758 AP4B1Q9Y6B7 739 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 PRR14LQ5THK1 2151 aa13.82□□□□□ -0.2
DDX56-202ENST00000415758 SEC14L5O43304 696 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 SCO2O43819 266 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 SMIM24O75264 130 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 AQP8O94778 261 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 ESRRBO95718 433 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 PLAUP00749 431 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 HSD3B1P14060 373 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 HSD3B2P26439 372 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 MAGEA12P43365 314 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 ETFDHQ16134 617 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 TMEM44Q2T9K0 475 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 CYP27C1Q4G0S4 372 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 OR7G2Q8NG99 324 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 OR6K3Q8NGY3 331 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 ZNF483Q8TF39 744 aaPredicted RBP13.81□□□□□ -0.2
DDX56-202ENST00000415758 MTBPQ96DY7 904 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 MRRFQ96E11 262 aaKnown RBP13.81□□□□□ -0.2
DDX56-202ENST00000415758 C1GALT1C1Q96EU7 318 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 SHCBP1LQ9BZQ2 653 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 PFDN4Q9NQP4 134 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 SLC35C2Q9NQQ7 365 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 XPR1Q9UBH6 696 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
DDX56-202ENST00000415758 ANK3Q12955 4377 aaKnown RBP13.8□□□□□ -0.2
DDX56-202ENST00000415758 IGLV3-32A0A0A0MS00 114 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 H3BML4 177 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 OVOL3O00110 214 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 IL3P08700 152 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 COL6A2P12110 1019 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 MPIP34949 423 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 CDH13P55290 713 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 HEPACAMQ14CZ8 416 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 TRADDQ15628 312 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 SGCBQ16585 318 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.8□□□□□ -0.2
DDX56-202ENST00000415758 EXOC3L2Q2M3D2 409 aa13.8□□□□□ -0.2
DDX56-202ENST00000415758 ADAM5Q6NVV9 412 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms