RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TO15178 435 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 RGS14O43566 566 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 PRAMEF2O60811 474 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 PRAMEF12O95522 483 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 S1PR4O95977 384 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 PAK4O96013 591 aaPredicted RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 TFP02787 698 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 ANXA5P08758 320 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 CEBPBP17676 345 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 ITPKAP23677 461 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 CALCRP30988 508 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 EIF2S3P41091 472 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 PTGER3P43115 390 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 P2RY4P51582 365 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 RAB2AP61019 212 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 ARF5P84085 180 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 ZNF528Q3MIS6 628 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 Q6ZPB1 254 aaPredicted RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 EEF1AKMT1Q8WVE0 214 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 HSH2DQ96JZ2 352 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 CDCP1Q9H5V8 836 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 XKR8Q9H6D3 395 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 OPA3Q9H6K4 179 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 IMP3Q9NV31 184 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 SLCO1C1Q9NYB5 712 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 SEC14L3Q9UDX4 400 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 BTNL2Q9UIR0 455 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 GPR160Q9UJ42 338 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 ATG2BQ96BY7 2078 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 LRRC14BA6NHZ5 514 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 MID1O15344 667 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 KERAO60938 352 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 LEFTY1O75610 366 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 POP7O75817 140 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 RGS11O94810 467 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 NUDT7P0C024 238 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 RNF224P0DH78 156 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 SPP1P10451 314 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 KDELR2P33947 212 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 CDKN2DP55273 166 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 RAP2BP61225 183 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 P2RY14Q15391 338 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 DHCR24Q15392 516 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 SPRED2Q7Z698 418 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 SLC9B2Q86UD5 537 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TOMM5Q8N4H5 51 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 PPP1R16AQ96I34 528 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 C7orf50Q9BRJ6 194 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 RIOK2Q9BVS4 552 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 DDX31Q9H8H2 851 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 ZFP57Q9NU63 452 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 CLEC4EQ9ULY5 219 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 DMRT1Q9Y5R6 373 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 SPIN1Q9Y657 262 aaPredicted RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3DA0A087WVF3 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3IA0A087WXS9 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3EA0A087X179 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3KA0A087X1G2 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 LOC390937A0A1W2PQ73 354 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3FA6NER0 549 aaPredicted RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 HEPACAM2A8MVW5 462 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3LB9A6J9 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 SUV39H1O43463 412 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 CSO75390 466 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 KRT33AO76009 404 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3HP0C7X1 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 UGT2B7P16662 529 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 AVPR1BP47901 424 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 IRF8Q02556 426 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 PTGR1Q14914 329 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 C4orf46Q504U0 113 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 C9orf50Q5SZB4 431 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3GQ6DHY5 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3CQ6IPX1 549 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 UBE2R2Q712K3 238 aaPredicted RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 PIANPQ8IYJ0 282 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TBC1D3Q8IZP1 549 aaPredicted RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 KLHL36Q8N4N3 616 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 FAM46DQ8NEK8 389 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 OR56B4Q8NH76 319 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 TMEM203Q969S6 136 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 C12orf66Q96MD2 445 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 CDK15Q96Q40 435 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 OR4K3Q96R72 315 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 MGME1Q9BQP7 344 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 AARSD1Q9BTE6 412 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 IFT27Q9BW83 186 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 SEMA4CQ9C0C4 833 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 ARL6Q9H0F7 186 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 POPDC3Q9HBV1 291 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 B3GAT2Q9NPZ5 323 aa7.39□□□□□ -1.23
SIK3-203ENST00000415541 EXO1Q9UQ84 846 aaKnown RBP7.39□□□□□ -1.23
SIK3-203ENST00000415541 EFCAB7A8K855 629 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 TERTO14746 1132 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 TPST2O60704 377 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 IGHV2-70P01814 119 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 CATP04040 527 aaKnown RBP7.38□□□□□ -1.23
SIK3-203ENST00000415541 PRNPP04156 253 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 APODP05090 189 aa7.38□□□□□ -1.23
SIK3-203ENST00000415541 EPB42P16452 691 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms