RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 RFPL4BQ6ZWI9 263 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 BZW1Q7L1Q6 419 aaKnown RBP4.39□□□□□ -1.71
LSM5-206ENST00000409987 ASRGL1Q7L266 308 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 DPY19L4Q7Z388 723 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 P4HA3Q7Z4N8 544 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 NFAM1Q8NET5 270 aaPredicted RBP4.39□□□□□ -1.71
LSM5-206ENST00000409987 SPATA4Q8NEY3 305 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 OR8K3Q8NH51 312 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 RDH11Q8TC12 318 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 MCUR1Q96AQ8 359 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 ZNF274Q96GC6 653 aaPredicted RBP4.39□□□□□ -1.71
LSM5-206ENST00000409987 AGAP3Q96P47 875 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 ERGIC2Q96RQ1 377 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CHP1Q99653 195 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CITED1Q99966 193 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 CHRDL1Q9BU40 450 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 TRIM9Q9C026 710 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 WDR13Q9H1Z4 485 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 POLD4Q9HCU8 107 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 S100A14Q9HCY8 104 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 UFSP2Q9NUQ7 469 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 GAB2Q9UQC2 676 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 RNF6Q9Y252 685 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 KLHDC2Q9Y2U9 406 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 WDR45Q9Y484 360 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 SELENOKQ9Y6D0 94 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 KIAA0586Q9BVV6 1533 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 NEDD4P46934 1319 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 KIF7Q2M1P5 1343 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 PHLPP2Q6ZVD8 1323 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 TNIKQ9UKE5 1360 aa4.39□□□□□ -1.71
LSM5-206ENST00000409987 PTPRGP23470 1445 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 A0A1B0GTQ1 180 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 MEIOCA2RUB1 952 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 SLC1A7O00341 560 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 FOXE1O00358 373 aaPredicted RBP4.38□□□□□ -1.71
LSM5-206ENST00000409987 SH2D1BO14796 132 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 ALOX15BO15296 676 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 RNF113AO15541 343 aaKnown RBP4.38□□□□□ -1.71
LSM5-206ENST00000409987 P2RX6O15547 441 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 SCGNO76038 276 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 CLDN1O95832 211 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 OTCP00480 354 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 OR8G3PP0DMU2 310 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 TROVE2P10155 538 aaKnown RBP eCLIP4.38□□□□□ -1.71
LSM5-206ENST00000409987 TPSB2P20231 275 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 SNRPD1P62314 119 aaKnown RBP4.38□□□□□ -1.71
LSM5-206ENST00000409987 ACY1Q03154 408 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 SRYQ05066 204 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 MTF1Q14872 753 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 TPSAB1Q15661 275 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 SYPL1Q16563 259 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 FAM106AQ4KMX7 169 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 CTSL3PQ5NE16 218 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 C10orf120Q5SQS8 335 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 ZNF841Q6ZN19 808 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 Q6ZRP5 223 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 PARGQ86W56 976 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 WDR49Q8IV35 697 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 OFCC1Q8IZS5 231 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 COMMD1Q8N668 190 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 CCDC185Q8N715 623 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 BPIFCQ8NFQ6 507 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 OR6S1Q8NH40 331 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 MAPK15Q8TD08 544 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 MRGPRDQ8TDS7 321 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 GPR148Q8TDV2 347 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 SMPDL3AQ92484 453 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 RPL3LQ92901 407 aaKnown RBP4.38□□□□□ -1.71
LSM5-206ENST00000409987 ISG20Q96AZ6 181 aaKnown RBP4.38□□□□□ -1.71
LSM5-206ENST00000409987 OMA1Q96E52 524 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 LURAP1Q96LR2 239 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 C12orf66Q96MD2 445 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 DCTN5Q9BTE1 182 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 IQCGQ9H095 443 aaKnown RBP4.38□□□□□ -1.71
LSM5-206ENST00000409987 VCPKMTQ9H867 229 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 RAB18Q9NP72 206 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 GDF3Q9NR23 364 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 PLCXD1Q9NUJ7 323 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 SMOXQ9NWM0 555 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 RPH3ALQ9UNE2 315 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 PPP1R3CQ9UQK1 317 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
LSM5-206ENST00000409987 MAP3K4Q9Y6R4 1608 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 PBRM1Q86U86 1689 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 CCDC7Q96M83 1385 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 PTPRTO14522 1441 aa4.38□□□□□ -1.71
LSM5-206ENST00000409987 LTBP4Q8N2S1 1624 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 ABCA5Q8WWZ7 1642 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 SNTNA6NMZ2 147 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 GOLGA8SH3BPF8 625 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 BTN3A3O00478 584 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 ARHGEF9O43307 516 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 RNF13O43567 381 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 TPST2O60704 377 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 CDH16O75309 829 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 LRCH4O75427 683 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 MTRF1O75570 445 aaKnown RBP4.37□□□□□ -1.71
LSM5-206ENST00000409987 FLOT1O75955 427 aa4.37□□□□□ -1.71
LSM5-206ENST00000409987 KRT6AP02538 564 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms