RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 LRIT2A6NDA9 550 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 OR6C70A6NIJ9 312 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 RHPN2P1A8MT19 583 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 HMGN4O00479 90 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 ADH1BP00325 375 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 CEACAM5P06731 702 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 CHRM4P08173 479 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 ADORA3P0DMS8 318 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 CRYZQ08257 329 aaKnown RBP10.96□□□□□ -0.65
DDR1-227ENST00000376570 FADDQ13158 208 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 KDM4DQ6B0I6 523 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 IZUMO1Q8IYV9 350 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 OR52E4Q8NGH9 312 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 ZMYND19Q96E35 227 aaPredicted RBP10.96□□□□□ -0.65
DDR1-227ENST00000376570 PCBD2Q9H0N5 130 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 IRF2BPLQ9H1B7 796 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 FN3KQ9H479 309 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 SRA1Q9HD15 236 aaKnown RBP10.96□□□□□ -0.65
DDR1-227ENST00000376570 C8orf4Q9NR00 106 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 C1GALT1Q9NS00 363 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 ACTR10Q9NZ32 417 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 ICKQ9UPZ9 632 aa10.96□□□□□ -0.65
DDR1-227ENST00000376570 ARAFP10398 606 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 HSD3B1P14060 373 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 PCSK2P16519 638 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 HSD3B2P26439 372 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 IFNGR2P38484 337 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 SNTA1Q13424 505 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 TCTN3Q6NUS6 607 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 RAB43Q86YS6 212 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 IL17RCQ8NAC3 791 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 NAXEQ8NCW5 288 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 SRFBP1Q8NEF9 429 aaKnown RBP10.96□□□□□ -0.66
DDR1-227ENST00000376570 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.66
DDR1-227ENST00000376570 GSDMCQ9BYG8 508 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 DKK3Q9UBP4 350 aa10.96□□□□□ -0.66
DDR1-227ENST00000376570 PPIEQ9UNP9 301 aaKnown RBP10.96□□□□□ -0.66
DDR1-227ENST00000376570 TMEM221A6NGB7 291 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 H7C1C5 153 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SOCS6O14544 535 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SCO2O43819 266 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SULT1C4O75897 302 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 CTSBP07858 339 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 ZNF24P17028 368 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 NDUFV2P19404 249 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 HOXA9P31269 272 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 PYCR1P32322 319 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 EPHA5P54756 1037 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 LCN6P62502 163 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 IFITM3Q01628 133 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 PUM1Q14671 1186 aaKnown RBP eCLIP10.95□□□□□ -0.66
DDR1-227ENST00000376570 GFOD2Q3B7J2 385 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 GGTA1PQ4G0N0 100 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 LCTLQ6UWM7 567 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 COMMD2Q86X83 199 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 CCDC71Q8IV32 467 aaPredicted RBP10.95□□□□□ -0.66
DDR1-227ENST00000376570 BBS1Q8NFJ9 593 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 OR4D11Q8NGI4 311 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 DNAJB8Q8NHS0 232 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 MAGIXQ9H6Y5 334 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 TMEM27Q9HBJ8 222 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 MCUBQ9NWR8 336 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 HPRP00739 348 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 FBXO45P0C2W1 286 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 PSKH1P11801 424 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 ZNF10P21506 573 aaPredicted RBP10.95□□□□□ -0.66
DDR1-227ENST00000376570 MMP11P24347 488 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SDC2P34741 201 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SOX18P35713 384 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 PSMB10P40306 273 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 PPP5CP53041 499 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 ZNF91Q05481 1191 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 VEZF1Q14119 521 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 PRPF38BQ5VTL8 546 aaKnown RBP10.95□□□□□ -0.66
DDR1-227ENST00000376570 METTL2BQ6P1Q9 378 aaKnown RBP10.95□□□□□ -0.66
DDR1-227ENST00000376570 PRICKLE2Q7Z3G6 844 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 NRROSQ86YC3 692 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 LRRC25Q8N386 305 aaPredicted RBP10.95□□□□□ -0.66
DDR1-227ENST00000376570 CREB3L4Q8TEY5 395 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 KLHDC7BQ96G42 594 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 MAN2B2Q9Y2E5 1009 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 GXYLT2A0PJZ3 443 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 URADA6NGE7 173 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 ZNF701M0R085 212 aaPredicted RBP10.95□□□□□ -0.66
DDR1-227ENST00000376570 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SSX4O60224 188 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 WBP4O75554 376 aaKnown RBP10.95□□□□□ -0.66
DDR1-227ENST00000376570 TFPIP10646 304 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SPNP16150 400 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 MAOAP21397 527 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 TPMTP51580 245 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 SMIM11AP58511 58 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 FCHO2Q0JRZ9 810 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 DMRTC1Q5HYR2 192 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 UNC5DQ6UXZ4 953 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 ARL14Q8N4G2 192 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 DNAJC22Q8N4W6 341 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 OR4N2Q8NGD1 307 aa10.95□□□□□ -0.66
DDR1-227ENST00000376570 OR6Q1Q8NGQ2 317 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms