RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 NPIPB15A6NHN6 443 aaPredicted RBP13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 RPS17P08708 135 aaKnown RBP13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 DEFB103AP81534 67 aa13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 PIN1Q13526 163 aaPredicted RBP13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 COMMD6Q7Z4G1 85 aa13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 SHISA4Q96DD7 197 aa13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 URM1Q9BTM9 101 aaKnown RBP13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 PRDM9Q9NQV7 894 aa13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 B3GNT2Q9NY97 397 aa13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 ERVK-19Q9WJR5 959 aa13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 SPO11Q9Y5K1 396 aa13.94□□□□□ -0.18
NOTCH4-201ENST00000375023 ONECUT3O60422 494 aaPredicted RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 MPC1LP0DKB6 136 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 GSTM4Q03013 218 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 EMC10Q5UCC4 262 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 HORMAD2Q8N7B1 307 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 TMPRSS11EQ9UL52 423 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 AK6Q9Y3D8 172 aaKnown RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 MED1Q15648 1581 aaPredicted RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 LOC102723532A0A0G2JNH3 316 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 GXYLT2A0PJZ3 443 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SLC1A7O00341 560 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 AGPAT2O15120 278 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SMAD6O43541 496 aaKnown RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 KDELR2P33947 212 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 CNR2P34972 360 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 FOXA1P55317 472 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 CSNK2A1P68400 391 aaPredicted RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 PTPRRQ15256 657 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 CLLU1OSQ5K130 101 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 CSNK2A3Q8NEV1 391 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 MAELQ96JY0 434 aaKnown RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SLC2A13Q96QE2 648 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 CDH20Q9HBT6 801 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 PCDHGB6Q9Y5F9 930 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 COL1A1P02452 1464 aaPredicted RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 C12orf71A8MTZ7 269 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 B8ZZF3 427 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 RASAL1O95294 804 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 WDPCPO95876 746 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 EDN1P05305 212 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 THBS2P35442 1172 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SLC18B1Q6NT16 456 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 ZNF610Q8N9Z0 462 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 OR5AK2Q8NH90 309 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SACM1LQ9NTJ5 587 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 ZNF225Q9UK10 706 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 DIRAS3O95661 229 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 PROS1P07225 676 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 ZNF28P17035 718 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 RPL26P61254 145 aaKnown RBP13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 CCNJQ5T5M9 372 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 LILRB2Q8N423 598 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SLCO2A1Q92959 643 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 MAB21L2Q9Y586 359 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SLC10A3P09131 477 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 FXNQ16595 210 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 MYRFLQ96LU7 910 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 MGLLQ99685 303 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 ZNF559Q9BR84 538 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 TRAV18A0A075B6X5 111 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 GNB3P16520 340 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 TCN2P20062 427 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 DCKP27707 260 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 ZNF136P52737 540 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 SLC14A2Q15849 920 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 ATG9BQ674R7 924 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 RAB7BQ96AH8 199 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 TCEAL4Q96EI5 215 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 KCNIP1Q9NZI2 227 aa13.93□□□□□ -0.18
NOTCH4-201ENST00000375023 BORCS7-ASMTA0A0B4J1R7 106 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 G3V3Y1 287 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 TMEM201Q5SNT2 666 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 LETMD1Q6P1Q0 360 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 TSSK4Q6SA08 328 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 SERINC5Q86VE9 423 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 C15orf40Q8WUR7 153 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 GAREM1Q9H706 876 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 FNIP2Q9P278 1114 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 RPH3ALQ9UNE2 315 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 NAALAD2Q9Y3Q0 740 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 LCKP06239 509 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 HOXD8P13378 290 aaPredicted RBP13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 C5AR1P21730 350 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 SLC6A11P48066 632 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 C6orf141Q5SZD1 244 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 OR8J3Q8NGG0 315 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 OR5H2Q8NGV7 314 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 CDS1Q92903 461 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 GCDHQ92947 438 aaPredicted RBP13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 ITFG2Q969R8 447 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 RHCEP18577 417 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 XCR1P46094 333 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 P2RY14Q15391 338 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 SPHARQ15513 63 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 GAB3Q8WWW8 586 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 SFXN2Q96NB2 322 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 ARRDC1-AS1Q9H2J1 176 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 UBQLN2Q9UHD9 624 aa13.92□□□□□ -0.18
NOTCH4-201ENST00000375023 PCTPQ9UKL6 214 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms