RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 THAP3Q8WTV1 239 aaPredicted RBP16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OSTF1Q92882 214 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SLC22A4Q9H015 551 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZNF639Q9UID6 485 aa16.62■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ANKRD36A6QL64 1941 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 A6NL46 340 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NDUFB5O43674 189 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 GBX1Q14549 363 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 INAVAQ3KP66 663 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 UBE2UQ5VVX9 321 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR2L3Q8NG85 312 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NEURL3Q96EH8 262 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SGPP1Q9BX95 441 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PHF11Q9UIL8 331 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 WDR87Q6ZQQ6 2873 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZDBF2Q9HCK1 2354 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TRBV5-3A0A0A0MS03 114 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 A0A0A6YYC8 382 aaPredicted RBP16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 C17orf113A0A1B0GUU1 675 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 I3L1I5 382 aaPredicted RBP16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 FUT1P19526 365 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 METRNLQ641Q3 311 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NKAIN4Q8IVV8 208 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NEK6Q9HC98 313 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TBC1D29Q9UFV1 150 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 A0A1W2PQ09 198 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CLEC3AO75596 197 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SLC25A12O75746 678 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NDUFV2P19404 249 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NDUFA9Q16795 377 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 KIAA1211LQ6NV74 962 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 GJD3Q8N144 294 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NUFIP1Q9UHK0 495 aaKnown RBP16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ERVK-11Q9UQG0 969 aa16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PCYT1BQ9Y5K3 369 aaPredicted RBP16.61■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PIP5K1CO60331 668 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 KHDRBS3O75525 346 aaKnown RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SNRPD2P62316 118 aaKnown RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RPLP0P6Q8NHW5 317 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LRRC37A2A6NM11 1700 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TDRD6O60522 2096 aaKnown RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PRSS38A1L453 326 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NOS1APO75052 506 aaPredicted RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RPS19P39019 145 aaKnown RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CD97P48960 835 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RPS25P62851 125 aaKnown RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SKP1P63208 163 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ENPP2Q13822 863 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TMEM35AQ53FP2 167 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 EIPR1Q53HC9 387 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZMYND19Q96E35 227 aaPredicted RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PTCHD1Q96NR3 888 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ACTRT3Q9BYD9 372 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SCN4AP35499 1836 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 IRGMA1A4Y4 181 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LRIT2A6NDA9 550 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PPP1R3DO95685 299 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PDX1P52945 283 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 POU6F2P78424 691 aaPredicted RBP16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PGBD2Q6P3X8 592 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CEACAM19Q7Z692 300 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 JAZF1Q86VZ6 243 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LMX1AQ8TE12 382 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TMEM255BQ8WV15 326 aa16.6■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SH3D21A4FU49 640 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NDUFS1P28331 727 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 KCNJ5P48544 419 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 FAM220AQ7Z4H9 259 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 DYNC2LI1Q8TCX1 351 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SPRYD4Q8WW59 207 aaPredicted RBP16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TAS2R7Q9NYW3 318 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RTTNQ86VV8 2226 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SEMA3DO95025 777 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SLC2A10O95528 541 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TNFP01375 233 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 WNT4P56705 351 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 RAB15P59190 212 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 BNC1Q01954 994 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 C9orf50Q5SZB4 431 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LAIR1Q6GTX8 287 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 Q6ZSR6 202 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LINGO2Q7L985 606 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PRICKLE2Q7Z3G6 844 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 ZER1Q7Z7L7 766 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 GPR135Q8IZ08 494 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 OR52E2Q8NGJ4 325 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 NECTIN4Q96NY8 510 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SRA1Q9HD15 236 aaKnown RBP16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PAQR5Q9NXK6 330 aaPredicted RBP16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SCN5AQ14524 2016 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 C11orf98E9PRG8 122 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 SOCS6O14544 535 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 CSO75390 466 aaKnown RBP16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 EDNRAP25101 427 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TIGD4Q8IY51 512 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 LRRC17Q8N6Y2 441 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PPP1R14BQ96C90 147 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 TGM7Q96PF1 710 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 PBX4Q9BYU1 374 aa16.59■□□□□ 0.25
TRAF3IP1-201ENST00000373327 KCNN2Q9H2S1 579 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms