RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 IMPAD1Q9NX62 359 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 ZAR1LA6NP61 321 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 TGFBR3LH3BV60 316 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 FRS3O43559 492 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 MRPS14O60783 128 aaKnown RBP23.27■■□□□ 1.32
CTSA-203ENST00000372459 GABRA3P34903 492 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 RGS8P57771 180 aaPredicted RBP23.27■■□□□ 1.32
CTSA-203ENST00000372459 CDC42P60953 191 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 POU6F2P78424 691 aaPredicted RBP23.27■■□□□ 1.32
CTSA-203ENST00000372459 TEKQ02763 1124 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 CFHR1Q03591 330 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 ERV3-1Q14264 604 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 OR51Q1Q8NH59 317 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 DGAT2Q96PD7 388 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 CTPS2Q9NRF8 586 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 REV1Q9UBZ9 1251 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 PCDHGB1Q9Y5G3 927 aa23.27■■□□□ 1.32
CTSA-203ENST00000372459 CACNA1IQ9P0X4 2223 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 AP3D1O14617 1153 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 OR2B3O76000 313 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 PDGFBP01127 241 aaPredicted RBP23.26■■□□□ 1.31
CTSA-203ENST00000372459 DBIP07108 87 aaKnown RBP23.26■■□□□ 1.31
CTSA-203ENST00000372459 CD1CP29017 333 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 HSD17B7P56937 341 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 SRSF5Q13243 272 aaKnown RBP23.26■■□□□ 1.31
CTSA-203ENST00000372459 ILKQ13418 452 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 ZNF836Q6ZNA1 936 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 OR4K5Q8NGD3 323 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 FNDC8Q8TC99 324 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 HOXB13Q92826 284 aaPredicted RBP23.26■■□□□ 1.31
CTSA-203ENST00000372459 PMM1Q92871 262 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 SLC38A4Q969I6 547 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 PRMT8Q9NR22 394 aaPredicted RBP23.26■■□□□ 1.31
CTSA-203ENST00000372459 ENAMQ9NRM1 1142 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 CUTCQ9NTM9 273 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 ERVK-18Q9QC07 812 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 SUSD2Q9UGT4 822 aa23.26■■□□□ 1.31
CTSA-203ENST00000372459 MN1Q10571 1320 aaPredicted RBP23.26■■□□□ 1.31
CTSA-203ENST00000372459 TMEM150CB9EJG8 249 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 NKX2-2O95096 273 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 S1PR1P21453 382 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 RPS4Y1P22090 263 aaKnown RBP23.25■■□□□ 1.31
CTSA-203ENST00000372459 POU1F1P28069 291 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 ENTPD1P49961 510 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 BTG2P78543 158 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 ST3GAL3Q11203 375 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 ZNHIT3Q15649 155 aaPredicted RBP23.25■■□□□ 1.31
CTSA-203ENST00000372459 C11orf74Q86VG3 221 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 MORN4Q8NDC4 146 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 POLR2J3Q9H1A7 115 aaKnown RBP23.25■■□□□ 1.31
CTSA-203ENST00000372459 POLE3Q9NRF9 147 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 NLGN3Q9NZ94 848 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 TMEM184BQ9Y519 407 aaPredicted RBP23.25■■□□□ 1.31
CTSA-203ENST00000372459 SPTBP11277 2137 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 CPSF4LA6NMK7 179 aaKnown RBP23.25■■□□□ 1.31
CTSA-203ENST00000372459 ZNF749O43361 778 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 KIAA0513O60268 411 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 CYP7B1O75881 506 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 MYF5P13349 255 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 ITIH1P19827 911 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 PCMT1P22061 227 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 TRAM2Q15035 370 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 SNAP47Q5SQN1 464 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 PRPF38BQ5VTL8 546 aaKnown RBP23.25■■□□□ 1.31
CTSA-203ENST00000372459 D2HGDHQ8N465 521 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 LHPPQ9H008 270 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 ANKRD19PQ9H560 264 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 ZNF226Q9NYT6 803 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 SEMA5BQ9P283 1151 aa23.25■■□□□ 1.31
CTSA-203ENST00000372459 A0A1W2PPW3 197 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 H3BMH7 237 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 RGS10O43665 173 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 CSF2RBP32927 897 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 EEF1A1P68104 462 aaKnown RBP23.24■■□□□ 1.31
CTSA-203ENST00000372459 COX10Q12887 443 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 GTF2IRD2BQ6EKJ0 949 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 CD300LDQ6UXZ3 194 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 GTF2IRD2Q86UP8 949 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 NLGN4XQ8N0W4 816 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 DIO2Q92813 273 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 LMF2Q9BU23 707 aaKnown RBP23.24■■□□□ 1.31
CTSA-203ENST00000372459 DUSP23Q9BVJ7 150 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 PRR14Q9BWN1 585 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 NAA50Q9GZZ1 169 aaKnown RBP23.24■■□□□ 1.31
CTSA-203ENST00000372459 PLCXD1Q9NUJ7 323 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 SDK1Q7Z5N4 2213 aa23.24■■□□□ 1.31
CTSA-203ENST00000372459 MPZL2O60487 215 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 TDGF1P13385 188 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 GABRB1P18505 474 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 EPHA8P29322 1005 aaPredicted RBP23.23■■□□□ 1.31
CTSA-203ENST00000372459 ENTPD8Q5MY95 495 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 TMEM236Q5W0B7 351 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 C1orf94Q6P1W5 598 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 FIGNL1Q6PIW4 674 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 WDR74Q6RFH5 385 aaPredicted RBP23.23■■□□□ 1.31
CTSA-203ENST00000372459 TTLL10Q6ZVT0 673 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 PLEKHM3Q6ZWE6 761 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 PRSS42Q7Z5A4 293 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 CCDC103Q8IW40 242 aa23.23■■□□□ 1.31
CTSA-203ENST00000372459 RAB2BQ8WUD1 216 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms