RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ERLIN1O75477 346 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 NKX2-2O95096 273 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 SNUPNO95149 360 aaKnown RBP17.25■□□□□ 0.35
CKS1B-203ENST00000368439 IL33O95760 270 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 IGKV1D-16P01601 117 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 HOXD4P09016 255 aaPredicted RBP17.25■□□□□ 0.35
CKS1B-203ENST00000368439 GABRA1P14867 456 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 BMP7P18075 431 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 CHRNB4P30926 498 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 GPC1P35052 558 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 HPCAL1P37235 193 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 RPL3P39023 403 aaKnown RBP17.25■□□□□ 0.35
CKS1B-203ENST00000368439 ADH7P40394 386 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 RPL14P50914 215 aaKnown RBP17.25■□□□□ 0.35
CKS1B-203ENST00000368439 C21orf58P58505 322 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 EMX2Q04743 252 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 PDCD2Q16342 344 aaPredicted RBP17.25■□□□□ 0.35
CKS1B-203ENST00000368439 SMU1Q2TAY7 513 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 DCST1Q5T197 706 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 YRDCQ86U90 279 aaKnown RBP17.25■□□□□ 0.35
CKS1B-203ENST00000368439 PLCZ1Q86YW0 608 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 NUP43Q8NFH3 380 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 LILRB4Q8NHJ6 448 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 CA5BP1Q8WTZ4 195 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 ASB5Q8WWX0 329 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 TLCD1Q96CP7 247 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 UGT2B28Q9BY64 529 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 RTN4RQ9BZR6 473 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 AKTIPQ9H8T0 292 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 TMBIM4Q9HC24 238 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 EQTNQ9NQ60 294 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 FBXL2Q9UKC9 423 aa17.25■□□□□ 0.35
CKS1B-203ENST00000368439 FBN2P35556 2912 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 A0A0G2JNJ9 132 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 TMEM120BA0PK00 339 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 KDM4EB2RXH2 506 aaPredicted RBP17.24■□□□□ 0.35
CKS1B-203ENST00000368439 ACP2P11117 423 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 G6PDP11413 515 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 GABRA3P34903 492 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 EVI2BP34910 448 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 SLC18A1P54219 525 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 MRPS22P82650 360 aaKnown RBP17.24■□□□□ 0.35
CKS1B-203ENST00000368439 TFF3Q07654 80 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 BST1Q10588 318 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 STX3Q13277 289 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 ZNHIT3Q15649 155 aaPredicted RBP17.24■□□□□ 0.35
CKS1B-203ENST00000368439 DECR1Q16698 335 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 ANKRD42Q8N9B4 389 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 CEP70Q8NHQ1 597 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 PSMA8Q8TAA3 256 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 PIK3R3Q92569 461 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 FAM120BQ96EK7 910 aaKnown RBP17.24■□□□□ 0.35
CKS1B-203ENST00000368439 WDYHV1Q96HA8 205 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 ALKBH4Q9NXW9 302 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 Q9UFV3 132 aa17.24■□□□□ 0.35
CKS1B-203ENST00000368439 APCP25054 2843 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 DCHS2Q6V1P9 2916 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 A0A1W2PRB8 838 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 AHRRA9YTQ3 701 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 EMC8O43402 210 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 TOXO94900 526 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 SRD5A2P31213 254 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 PTGER4P35408 488 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 PRKAG1P54619 331 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 CLDN8P56748 225 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 MAD2L1Q13257 205 aaPredicted RBP17.23■□□□□ 0.35
CKS1B-203ENST00000368439 TOMM20Q15388 145 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 CPTPQ5TA50 214 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 OR5M10Q6IEU7 315 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 MFSD12Q6NUT3 480 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 CAMKMTQ7Z624 323 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 CDRT4Q8N9R6 151 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 FAM110BQ8TC76 370 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 C16orf58Q96GQ5 468 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 PPP1R36Q96LQ0 422 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 MS4A4EQ96PG1 132 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 TREX2Q9BQ50 279 aaPredicted RBP17.23■□□□□ 0.35
CKS1B-203ENST00000368439 UCK2Q9BZX2 261 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 ENKD1Q9H0I2 346 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 C3orf14Q9HBI5 128 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 PNPOQ9NVS9 261 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 NOP53Q9NZM5 478 aaKnown RBP17.23■□□□□ 0.35
CKS1B-203ENST00000368439 ABCG2Q9UNQ0 655 aa17.23■□□□□ 0.35
CKS1B-203ENST00000368439 EIF3LQ9Y262 564 aaKnown RBP17.23■□□□□ 0.35
CKS1B-203ENST00000368439 MRPS18CQ9Y3D5 142 aaKnown RBP17.23■□□□□ 0.35
CKS1B-203ENST00000368439 INTS1Q8N201 2190 aaKnown RBP17.22■□□□□ 0.35
CKS1B-203ENST00000368439 NKX2-6A6NCS4 301 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 EPPINO95925 133 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 DDX5P17844 614 aaKnown RBP17.22■□□□□ 0.35
CKS1B-203ENST00000368439 PRPS1L1P21108 318 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 DIO3P55073 304 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 GFRA1P56159 465 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 MAGOHP61326 146 aaKnown RBP17.22■□□□□ 0.35
CKS1B-203ENST00000368439 DUSP5Q16690 384 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 ACSF3Q4G176 576 aaPredicted RBP17.22■□□□□ 0.35
CKS1B-203ENST00000368439 RIPPLY2Q5TAB7 128 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 APOOLQ6UXV4 268 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 LIX1LQ8IVB5 337 aa17.22■□□□□ 0.35
CKS1B-203ENST00000368439 NATD1Q8N6N6 113 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms